RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ZMYND8Q9ULU4 1186 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 ADAMTS5Q9UNA0 930 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 COX11Q9Y6N1 276 aa4.33□□□□□ -1.72
TRAPPC13-204ENST00000438419 COL15A1P39059 1388 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 AGPSO00116 658 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 PMPCBO75439 489 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 FAM163BP0C2L3 166 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 ENGP17813 658 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 E2F1Q01094 437 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 NSUN2Q08J23 767 aaKnown RBP eCLIP4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 CYP1B1Q16678 543 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 AKNAD1Q5T1N1 836 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 TSTD2Q5T7W7 516 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 ABLIM2Q6H8Q1 611 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 CLEC9AQ6UXN8 241 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 DPY19L3Q6ZPD9 716 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 USP49Q70CQ1 688 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 SLC29A4Q7RTT9 530 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 RD3Q7Z3Z2 195 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 RASAL3Q86YV0 1011 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 MYLK4Q86YV6 388 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 NGDNQ8NEJ9 315 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 CRAMP1Q96RY5 1269 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 PRR25Q96S07 402 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 WDR12Q9GZL7 423 aaKnown RBP4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 AS3MTQ9HBK9 375 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 CDC23Q9UJX2 597 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 CA14Q9ULX7 337 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 MAGED2Q9UNF1 606 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 SLC27A6Q9Y2P4 619 aa4.32□□□□□ -1.72
TRAPPC13-204ENST00000438419 A0A087WV62 115 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 OR2W5A6NFC9 320 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 A8MVJ9 347 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 TMPRSS11DO60235 418 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 ARP10275 920 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 MYCLP12524 364 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 GPD1P21695 349 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 NTSR1P30989 418 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 IL6STP40189 918 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 CHAF1AQ13111 956 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 ATP1A4Q13733 1029 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 RAB30Q15771 203 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 PCID2Q5JVF3 399 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 RAP1GAP2Q684P5 730 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 CEP85Q6P2H3 762 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 PGBD2Q6P3X8 592 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 PTCHD4Q6ZW05 846 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 FSTL5Q8N475 847 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 ENAHQ8N8S7 591 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 MUL1Q969V5 352 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 CPNE5Q9HCH3 593 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 SNX15Q9NRS6 342 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 AMFRQ9UKV5 643 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 TNFRSF18Q9Y5U5 241 aa4.31□□□□□ -1.72
TRAPPC13-204ENST00000438419 SPATA31A6Q5VVP1 1343 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 GOLGA6L3A6NEY3 463 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 F5H423 210 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 AP4M1O00189 453 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 IFRD1O00458 451 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 CES2O00748 559 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 ZNF213O14771 459 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 FFAR2O15552 330 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 WDR47O94967 919 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 GLP2RO95838 553 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 VIPP01282 170 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 CREB1P16220 341 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 PECAM1P16284 738 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 HTR7P34969 479 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 ELLP55199 621 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 EIF4A1P60842 406 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 KRT72Q14CN4 511 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 GRAMD1BQ3KR37 738 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 ZNF575Q86XF7 245 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 SFTPA1Q8IWL2 248 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 METTL25Q8N6Q8 603 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 C11orf44Q8N8P7 122 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 ZNF527Q8NB42 609 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 SUN3Q8TAQ9 357 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 SARAFQ96BY9 339 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 GRAMD1AQ96CP6 724 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 WDYHV1Q96HA8 205 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 VPS50Q96JG6 964 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 THAP7Q9BT49 309 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 CRB3Q9BUF7 120 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 PPCSQ9HAB8 311 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 TMEM8AQ9HCN3 771 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 PTPRHQ9HD43 1115 aa4.3□□□□□ -1.72
TRAPPC13-204ENST00000438419 SPRY2O43597 315 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 SKAP2O75563 359 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 TMEM225BP0DP42 221 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 TRAPPC10P48553 1259 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 DGKQP52824 942 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 PROK1P58294 105 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 NHLH1Q02575 133 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 ICA1Q05084 483 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 ACOX1Q15067 660 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 ARHGAP15Q53QZ3 475 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 TMEM63BQ5T3F8 832 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 L1TD1Q5T7N2 865 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 TLDC1Q6P9B6 456 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms