RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 DNMT3LQ9UJW3 386 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 LSM7Q9UK45 103 aaKnown RBP15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 MAN1B1Q9UKM7 699 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 APODP05090 189 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 CYP17A1P05093 508 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 OPRD1P41143 372 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 FMO5P49326 533 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 UBE2HP62256 183 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 COG7P83436 770 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 CUL2Q13617 745 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 CCDC40Q4G0X9 1142 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 CBWD6Q4V339 395 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 ZNF394Q53GI3 561 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 CBWD3Q5JTY5 395 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 CBWD5Q5RIA9 395 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 CACNA2D4Q7Z3S7 1137 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 C11orf74Q86VG3 221 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 RPLP0P6Q8NHW5 317 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 GAB3Q8WWW8 586 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 TATDN2Q93075 761 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 KLF16Q9BXK1 252 aaPredicted RBP15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 OTOGLQ3ZCN5 2332 aa15.31■□□□□ 0.04
NIF3L1-205ENST00000409588 PPP1R3GB7ZBB8 358 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 K7EQS6 105 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 HOXC11O43248 304 aaPredicted RBP15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 APBB3O95704 486 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 PAEPP09466 180 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 VDRP11473 427 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 ADH5P11766 374 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 RARGP13631 454 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 MARSP56192 900 aaKnown RBP15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 LMNB2Q03252 620 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 PUM1Q14671 1186 aaKnown RBP eCLIP15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 STILQ15468 1287 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 SGO2Q562F6 1265 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 RAB41Q5JT25 222 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 TTI2Q6NXR4 508 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 PRR23BQ6ZRT6 265 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 CEP68Q76N32 757 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 TRMT11Q7Z4G4 463 aaKnown RBP15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 DCLK2Q8N568 766 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 USP33Q8TEY7 942 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 ERCC4Q92889 916 aaPredicted RBP15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 JAKMIP2Q96AA8 810 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 RNF25Q96BH1 459 aaPredicted RBP15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 ZC3H10Q96K80 434 aaKnown RBP15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 DCLK3Q9C098 648 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 SPHK2Q9NRA0 654 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 CHMP5Q9NZZ3 219 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 DEC1Q9P2X7 70 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 HESX1Q9UBX0 185 aa15.3■□□□□ 0.04
NIF3L1-205ENST00000409588 HELZP42694 1942 aaKnown RBP15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 TRIM49BA6NDI0 452 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 RPP40O75818 363 aaKnown RBP15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 KAT7O95251 611 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 CHKAP35790 457 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 DGKEP52429 567 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 DMC1Q14565 340 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 E2F5Q15329 346 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 GAB4Q2WGN9 574 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 LY6G5CQ5SRR4 150 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 HEATR6Q6AI08 1181 aaKnown RBP15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 PM20D1Q6GTS8 502 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 FAM81BQ96LP2 452 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 NT5C1BQ96P26 610 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 XPO6Q96QU8 1125 aaKnown RBP15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 NAGPAQ9UK23 515 aa15.29■□□□□ 0.04
NIF3L1-205ENST00000409588 A0A1W2PQH9 124 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 RIOK3O14730 519 aaKnown RBP15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 XPO1O14980 1071 aaKnown RBP15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 AXIN1O15169 862 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 CYP26A1O43174 497 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 ALDH1A2O94788 518 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 CCDC192P0DO97 292 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 BCAT1P54687 386 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 GCNT1Q02742 428 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 DMWDQ09019 674 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 PAK1Q13153 545 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 CSRP2Q16527 193 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 C10orf120Q5SQS8 335 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 ISM2Q6H9L7 571 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 PKN3Q6P5Z2 889 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 GPRIN1Q7Z2K8 1008 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 PIGZQ86VD9 579 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 SCML4Q8N228 414 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 KCTD13Q8WZ19 329 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 EZH1Q92800 747 aaPredicted RBP15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 ARHGEF4Q9NR80 690 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 OLA1Q9NTK5 396 aaKnown RBP15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 C2orf42Q9NWW7 574 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 DLL3Q9NYJ7 618 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 MARK1Q9P0L2 795 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 KIAA1468Q9P260 1216 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 MMP17Q9ULZ9 603 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 STARD13Q9Y3M8 1113 aa15.28■□□□□ 0.04
NIF3L1-205ENST00000409588 PCDHGA5Q9Y5G8 931 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms