RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 KDSRQ06136 332 aa15□□□□□ -0.01
NELFE-201ENST00000375425 SF3A2Q15428 464 aaKnown RBP15□□□□□ -0.01
NELFE-201ENST00000375425 COBLL1Q53SF7 1204 aa15□□□□□ -0.01
NELFE-201ENST00000375425 TMEM92Q6UXU6 159 aa15□□□□□ -0.01
NELFE-201ENST00000375425 ETFBKMTQ8IXQ9 262 aa15□□□□□ -0.01
NELFE-201ENST00000375425 PHTF2Q8N3S3 785 aa15□□□□□ -0.01
NELFE-201ENST00000375425 ALLCQ8N6M5 410 aa15□□□□□ -0.01
NELFE-201ENST00000375425 IL17RCQ8NAC3 791 aa15□□□□□ -0.01
NELFE-201ENST00000375425 TXNDC5Q8NBS9 432 aaKnown RBP15□□□□□ -0.01
NELFE-201ENST00000375425 SPATA20Q8TB22 786 aa15□□□□□ -0.01
NELFE-201ENST00000375425 TATDN2Q93075 761 aa15□□□□□ -0.01
NELFE-201ENST00000375425 TMEM176AQ96HP8 235 aa15□□□□□ -0.01
NELFE-201ENST00000375425 FAXDC2Q96IV6 333 aa15□□□□□ -0.01
NELFE-201ENST00000375425 TSG101Q99816 390 aa15□□□□□ -0.01
NELFE-201ENST00000375425 TPSD1Q9BZJ3 242 aa15□□□□□ -0.01
NELFE-201ENST00000375425 ZDHHC4Q9NPG8 344 aa15□□□□□ -0.01
NELFE-201ENST00000375425 NUDT5Q9UKK9 219 aa15□□□□□ -0.01
NELFE-201ENST00000375425 PCDHGA5Q9Y5G8 931 aa15□□□□□ -0.01
NELFE-201ENST00000375425 SGK1O00141 431 aa15□□□□□ -0.01
NELFE-201ENST00000375425 HOXC11O43248 304 aaPredicted RBP15□□□□□ -0.01
NELFE-201ENST00000375425 TULP3O75386 442 aa15□□□□□ -0.01
NELFE-201ENST00000375425 RHOBTB1O94844 696 aa15□□□□□ -0.01
NELFE-201ENST00000375425 SMC2O95347 1197 aa15□□□□□ -0.01
NELFE-201ENST00000375425 KLF8O95600 359 aaPredicted RBP15□□□□□ -0.01
NELFE-201ENST00000375425 RARGP13631 454 aa15□□□□□ -0.01
NELFE-201ENST00000375425 HNRNPLP14866 589 aaKnown RBP eCLIP15□□□□□ -0.01
NELFE-201ENST00000375425 GBP1P32455 592 aa15□□□□□ -0.01
NELFE-201ENST00000375425 PMS1P54277 932 aaKnown RBP15□□□□□ -0.01
NELFE-201ENST00000375425 ELF2Q15723 593 aa15□□□□□ -0.01
NELFE-201ENST00000375425 CBWD6Q4V339 395 aa15□□□□□ -0.01
NELFE-201ENST00000375425 USP39Q53GS9 565 aaKnown RBP15□□□□□ -0.01
NELFE-201ENST00000375425 DCAF17Q5H9S7 520 aaPredicted RBP15□□□□□ -0.01
NELFE-201ENST00000375425 CBWD3Q5JTY5 395 aa15□□□□□ -0.01
NELFE-201ENST00000375425 PLA2G2CQ5R387 149 aa15□□□□□ -0.01
NELFE-201ENST00000375425 CBWD5Q5RIA9 395 aa15□□□□□ -0.01
NELFE-201ENST00000375425 TCERG1LQ5VWI1 586 aa15□□□□□ -0.01
NELFE-201ENST00000375425 ANO7Q6IWH7 933 aa15□□□□□ -0.01
NELFE-201ENST00000375425 RASSF3Q86WH2 238 aa15□□□□□ -0.01
NELFE-201ENST00000375425 TTC30AQ86WT1 665 aa15□□□□□ -0.01
NELFE-201ENST00000375425 C12orf50Q8NA57 414 aaPredicted RBP15□□□□□ -0.01
NELFE-201ENST00000375425 MDGA1Q8NFP4 955 aa15□□□□□ -0.01
NELFE-201ENST00000375425 SMARCE1Q969G3 411 aa15□□□□□ -0.01
NELFE-201ENST00000375425 ARID3AQ99856 593 aa15□□□□□ -0.01
NELFE-201ENST00000375425 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15□□□□□ -0.01
NELFE-201ENST00000375425 DEC1Q9P2X7 70 aa15□□□□□ -0.01
NELFE-201ENST00000375425 NAGPAQ9UK23 515 aa15□□□□□ -0.01
NELFE-201ENST00000375425 USP3Q9Y6I4 520 aa15□□□□□ -0.01
NELFE-201ENST00000375425 MDM4O15151 490 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 TRIM24O15164 1050 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 CHRM1P11229 460 aaPredicted RBP14.99□□□□□ -0.01
NELFE-201ENST00000375425 PLA2G4AP47712 749 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 RAD23BP54727 409 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 GOLGA8FQ08AF8 430 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 GOLGA8DPQ0D2H9 430 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 HSF5Q4G112 596 aaPredicted RBP14.99□□□□□ -0.01
NELFE-201ENST00000375425 PREPLQ4J6C6 727 aaPredicted RBP14.99□□□□□ -0.01
NELFE-201ENST00000375425 AASDHQ4L235 1098 aaPredicted RBP14.99□□□□□ -0.01
NELFE-201ENST00000375425 C10orf120Q5SQS8 335 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 KLHDC10Q6PID8 442 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 CCDC186Q7Z3E2 898 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 SCD5Q86SK9 330 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 ZC3H3Q8IXZ2 948 aaKnown RBP14.99□□□□□ -0.01
NELFE-201ENST00000375425 TTC39CQ8N584 583 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 SLC4A11Q8NBS3 891 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 CNOT6LQ96LI5 555 aaKnown RBP14.99□□□□□ -0.01
NELFE-201ENST00000375425 SMOC1Q9H4F8 434 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 RXFP3Q9NSD7 469 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 DNMT3LQ9UJW3 386 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 NCOR2Q9Y618 2525 aa14.99□□□□□ -0.01
NELFE-201ENST00000375425 MYOFQ9NZM1 2061 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 TRIM49BA6NDI0 452 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 SLC16A3O15427 465 aaKnown RBP14.98□□□□□ -0.01
NELFE-201ENST00000375425 ADAM23O75077 832 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 ALDH1A2O94788 518 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 MPLP40238 635 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 PSEN1P49768 467 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 CREB5Q02930 508 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 EOGTQ5NDL2 527 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 ISM2Q6H9L7 571 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 TPGS1Q6ZTW0 290 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 NUDT18Q6ZVK8 323 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 TIGD1Q96MW7 591 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 BBS2Q9BXC9 721 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 UBXN6Q9BZV1 441 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 POLMQ9NP87 494 aaPredicted RBP14.98□□□□□ -0.01
NELFE-201ENST00000375425 HOOK1Q9UJC3 728 aaKnown RBP14.98□□□□□ -0.01
NELFE-201ENST00000375425 LSM7Q9UK45 103 aaKnown RBP14.98□□□□□ -0.01
NELFE-201ENST00000375425 COQ4Q9Y3A0 265 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 SPTBN2O15020 2390 aa14.98□□□□□ -0.01
NELFE-201ENST00000375425 NEDD8-MDP1E9PL57 170 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 RALAP11233 206 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 TYRP14679 529 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 LRRC63Q05C16 580 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 ARHGAP17Q68EM7 881 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 TADA2BQ86TJ2 420 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 MIB1Q86YT6 1006 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 ZNF276Q8N554 614 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 ZNF513Q8N8E2 541 aaPredicted RBP14.97□□□□□ -0.01
NELFE-201ENST00000375425 TERB1Q8NA31 727 aa14.97□□□□□ -0.01
NELFE-201ENST00000375425 ANKRD52Q8NB46 1076 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms