RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 SCLYQ96I15 445 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 RPGRIP1Q96KN7 1286 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 HRASLS5Q96KN8 279 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 Q96M66 194 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PPP1R9BQ96SB3 815 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ACO2Q99798 780 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 AARSD1Q9BTE6 412 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GBP3Q9H0R5 595 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 OR10A4Q9H209 315 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CLSTN2Q9H4D0 955 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PARD6AQ9NPB6 346 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PRR13Q9NZ81 148 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 EIF2B4Q9UI10 523 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GRID1Q9ULK0 1009 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 USP18Q9UMW8 372 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PLAGL2Q9UPG8 496 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 DTNAQ9Y4J8 743 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHB12Q9Y5F1 795 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SNX8Q9Y5X2 465 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 U3KQE9 123 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 RALGAPA2Q2PPJ7 1873 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 KIF20BQ96Q89 1820 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GPR75-ASB3A0A0A6YYF3 556 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PI4KAP2A4QPH2 592 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 LACTBL1A8MY62 500 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 KIF2AO00139 706 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 DDX39AO00148 427 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PRRG2O14669 202 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 LINC01565O15544 149 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 NOL3O60936 208 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 RTN2O75298 545 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PAPLNO95428 1278 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ANXA1P04083 346 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PCP11498 1178 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 HARSP12081 509 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CYBAP13498 195 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GAP43P17677 238 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ARF4P18085 180 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PAMP19021 973 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PSMA4P25789 261 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CNTFP26441 200 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 HOXD13P35453 343 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ACTN2P35609 894 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 RGS2P41220 211 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 IFNAR2P48551 515 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SULT1E1P49888 294 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 IL2P60568 153 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 RBP5P82980 135 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 TNK2Q07912 1038 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 KLHL30Q0D2K2 578 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CCDC173Q0VFZ6 552 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 IKQ13123 557 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SP140Q13342 867 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ZNF460Q14592 562 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 KCNB1Q14721 858 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 LLGL1Q15334 1064 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 NKPD1Q17RQ9 610 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CLEC16AQ2KHT3 1053 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CCDC152Q4G0S7 254 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 MFSD14CQ5VZR4 134 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 FAM47EQ6ZV65 393 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 OVCH2Q7RTZ1 564 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ANKRD33Q7Z3H0 272 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PRPF39Q86UA1 669 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 VSIG10LQ86VR7 867 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 NOSTRINQ8IVI9 506 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SYTL1Q8IYJ3 562 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CCDC170Q8IYT3 715 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PRR18Q8N4B5 295 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CAMKK1Q8N5S9 505 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GSTCDQ8NEC7 633 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ANKRD20A12PQ8NF67 263 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 MOSPD2Q8NHP6 518 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 NPLOC4Q8TAT6 608 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GDAP1Q8TB36 358 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 HPS3Q969F9 1004 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GIMAP5Q96F15 307 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 FAM89AQ96GI7 184 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 RBM14Q96PK6 669 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CRACR2AQ9BSW2 395 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 TTPALQ9BTX7 342 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 HGH1Q9BTY7 390 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 MMTAG2Q9BU76 263 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GPR62Q9BZJ7 368 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 TSPYL1Q9H0U9 437 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SIL1Q9H173 461 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 MTIF3Q9H2K0 278 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PREBQ9HCU5 417 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 DMRT3Q9NQL9 472 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 HAUS2Q9NVX0 235 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GPATCH2Q9NW75 528 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ADPRHL2Q9NX46 363 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 MCM9Q9NXL9 1143 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 TBC1D14Q9P2M4 693 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 FBXL21Q9UKT6 434 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 VAV3Q9UKW4 847 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms