RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 KRT82Q9NSB4 513 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 ZNHIT6Q9NWK9 470 aaKnown RBP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 ARMCX3Q9UH62 379 aaPredicted RBP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 G3BP2Q9UN86 482 aaKnown RBP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 USTQ9Y2C2 406 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 CEP295Q9C0D2 2601 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 ATMQ13315 3056 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 NAV2Q8IVL1 2488 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 TCRBV21S2A2A0A5A6 115 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 TMEM110-MUSTN1A8MSY1 372 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 SLC31A1O15431 190 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 LZTS3O60299 673 aaPredicted RBP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 OPHN1O60890 802 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 SLITRK3O94933 977 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 SYPP08247 313 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 HNRNPA1P09651 372 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 MCF2P10911 925 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 LMAN1P49257 510 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 SLC11A2P49281 568 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 CBLBQ13191 982 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 RSPO4Q2I0M5 234 aaPredicted RBP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 AGMOQ6ZNB7 445 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 NRSN1Q8IZ57 195 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 SLC44A3Q8N4M1 653 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 CELF5Q8N6W0 485 aaKnown RBP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 RPLP0P6Q8NHW5 317 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 PRCCQ92733 491 aaPredicted RBP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 SLC5A5Q92911 643 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 NT5C1BQ96P26 610 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 REEP2Q9BRK0 252 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 RUSC1Q9BVN2 902 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 MINDY3Q9H8M7 445 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 VPS28Q9UK41 221 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 KCNH3Q9ULD8 1083 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 MRFAP1Q9Y605 127 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 CPQQ9Y646 472 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.98□□□□□ -1.77
SMC1B-201ENST00000357450 ABCA12Q86UK0 2595 aa3.98□□□□□ -1.77
SMC1B-201ENST00000357450 TMCO5BA8MYB1 307 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 F8W810 466 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 M0QYV0 167 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 SCAMP1O15126 338 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 ARRB1P49407 418 aaPredicted RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 SRSF5Q13243 272 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 E2F5Q15329 346 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TANGO2Q6ICL3 276 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TOGARAM2Q6ZUX3 1019 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 GPR149Q86SP6 731 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 NPAS3Q8IXF0 933 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 KCTD17Q8N5Z5 321 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TXNDC5Q8NBS9 432 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 DEFB124Q8NES8 71 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 SPPL2BQ8TCT7 592 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 JPH3Q8WXH2 748 aaPredicted RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 EDEM1Q92611 657 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 ANKS1AQ92625 1134 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 RPRD1AQ96P16 312 aaPredicted RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 MYADMQ96S97 322 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 LLPHQ9BRT6 129 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TMEM175Q9BSA9 504 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 GPR174Q9BXC1 333 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 SCAND2PQ9GZW5 306 aaPredicted RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TLR8Q9NR97 1041 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 ABCF3Q9NUQ8 709 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TUBGCP4Q9UGJ1 667 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 AFF4Q9UHB7 1163 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 NEU2Q9Y3R4 380 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 GPSM3Q9Y4H4 160 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 DENND4AQ7Z401 1863 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 FFAR2O15552 330 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 IL18RAPO95256 599 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 FGF19O95750 216 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 RPL9P32969 192 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 ATP5C1P36542 298 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 LONP1P36776 959 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 CETN2P41208 172 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 PDGFRLQ15198 375 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 SF3A2Q15428 464 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 SGO2Q562F6 1265 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TRAF7Q6Q0C0 670 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TMEM270Q6UE05 265 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 C6orf89Q6UWU4 347 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 FAM43BQ6ZT52 329 aaPredicted RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TMEM173Q86WV6 379 aaPredicted RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 CCDC50Q8IVM0 306 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 SCG3Q8WXD2 468 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 DDX1Q92499 740 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 KLK6Q92876 244 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 ATP2A3Q93084 1043 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 ELMO3Q96BJ8 720 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 ASIC4Q96FT7 647 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 AHCYL2Q96HN2 611 aaKnown RBP3.97□□□□□ -1.77
SMC1B-201ENST00000357450 IL12RB2Q99665 862 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 LPIN3Q9BQK8 851 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 FERMT1Q9BQL6 677 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 PAAF1Q9BRP4 392 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 TNMDQ9H2S6 317 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 SMOC2Q9H3U7 446 aa3.97□□□□□ -1.77
SMC1B-201ENST00000357450 APOBEC2Q9Y235 224 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms