RNA–Protein interactions for RNA: ENST00000293922.1

PTX4-201, Transcript of pentraxin 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTX4, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-201ENST00000293922 BPIFB1Q8TDL5 484 aa19.23■□□□□ 0.67
PTX4-201ENST00000293922 USP13Q92995 863 aaPredicted RBP19.23■□□□□ 0.67
PTX4-201ENST00000293922 CLDN23Q96B33 292 aa19.23■□□□□ 0.67
PTX4-201ENST00000293922 ZFYVE19Q96K21 471 aa19.23■□□□□ 0.67
PTX4-201ENST00000293922 NELL2Q99435 816 aa19.23■□□□□ 0.67
PTX4-201ENST00000293922 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
PTX4-201ENST00000293922 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTX4-201ENST00000293922 F8VP50 259 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 DDX3XO00571 662 aaKnown RBP eCLIP19.22■□□□□ 0.67
PTX4-201ENST00000293922 MAN2B1O00754 1011 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 NBL1P41271 181 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 KIF11P52732 1056 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 USP46P62068 366 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 ARHGAP29Q52LW3 1261 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 TAF3Q5VWG9 929 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 LCLAT1Q6UWP7 414 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 DENND5BQ6ZUT9 1274 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 C1orf210Q8IVY1 113 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 CELF5Q8N6W0 485 aaKnown RBP19.22■□□□□ 0.67
PTX4-201ENST00000293922 C8orf48Q96LL4 319 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 B3GNT5Q9BYG0 378 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 DEF6Q9H4E7 631 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 ADAMTS1Q9UHI8 967 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 MRPS17Q9Y2R5 130 aaKnown RBP19.22■□□□□ 0.67
PTX4-201ENST00000293922 PTPRDP23468 1912 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 TICRRQ7Z2Z1 1910 aa19.22■□□□□ 0.67
PTX4-201ENST00000293922 OBSL1O75147 1896 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 DENND4CQ5VZ89 1909 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 A0A087X0T9 212 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 PROB1E7EW31 1015 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 CLDN5O00501 218 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 TRIM66O15016 1216 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 AKR1B10O60218 316 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 FAM228BP0C875 321 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 TNFAIP3P21580 790 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 CYLC1P35663 651 aaPredicted RBP19.21■□□□□ 0.67
PTX4-201ENST00000293922 MLLT6P55198 1093 aaPredicted RBP19.21■□□□□ 0.67
PTX4-201ENST00000293922 MTF1Q14872 753 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 SLC18A3Q16572 532 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 PPP1R26Q5T8A7 1209 aaPredicted RBP19.21■□□□□ 0.67
PTX4-201ENST00000293922 TRIM72Q6ZMU5 477 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 RIN3Q8TB24 985 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 CSGALNACT1Q8TDX6 532 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 CYFIP2Q96F07 1278 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 SLC22A12Q96S37 553 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 PCDHB18PQ96TA0 734 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 TTLL2Q9BWV7 592 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 FAM49BQ9NUQ9 324 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 TDP1Q9NUW8 608 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 NENFQ9UMX5 172 aa19.21■□□□□ 0.67
PTX4-201ENST00000293922 EPN1Q9Y6I3 576 aaPredicted RBP19.21■□□□□ 0.67
PTX4-201ENST00000293922 EIF3CLB5ME19 914 aaKnown RBP19.2■□□□□ 0.66
PTX4-201ENST00000293922 NDUFA10O95299 355 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 LCA5LO95447 670 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 RPS9P46781 194 aaKnown RBP19.2■□□□□ 0.66
PTX4-201ENST00000293922 SOX9P48436 509 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 TNK2Q07912 1038 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 PAQR9Q6ZVX9 377 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 MAML2Q8IZL2 1156 aaPredicted RBP19.2■□□□□ 0.66
PTX4-201ENST00000293922 FUKQ8N0W3 1084 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 FAM3CQ92520 227 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 CYP2S1Q96SQ9 504 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 EIF3CQ99613 913 aaKnown RBP19.2■□□□□ 0.66
PTX4-201ENST00000293922 HNRNPABQ99729 332 aaKnown RBP19.2■□□□□ 0.66
PTX4-201ENST00000293922 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTX4-201ENST00000293922 LHX5Q9H2C1 402 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 GTSE1Q9NYZ3 720 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 TSPAN16Q9UKR8 245 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 NDRG2Q9UN36 371 aaKnown RBP19.2■□□□□ 0.66
PTX4-201ENST00000293922 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTX4-201ENST00000293922 MIA3Q5JRA6 1907 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 CACNA1IQ9P0X4 2223 aa19.2■□□□□ 0.66
PTX4-201ENST00000293922 NCAM2O15394 837 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 LSM8O95777 96 aaKnown RBP19.19■□□□□ 0.66
PTX4-201ENST00000293922 CYP1A1P04798 512 aaPredicted RBP19.19■□□□□ 0.66
PTX4-201ENST00000293922 CCDC130P13994 396 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 CDH5P33151 784 aaPredicted RBP19.19■□□□□ 0.66
PTX4-201ENST00000293922 MAGEA9P43362 315 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 ZNF268Q14587 947 aaPredicted RBP19.19■□□□□ 0.66
PTX4-201ENST00000293922 PKDCCQ504Y2 493 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 SLC2A14Q8TDB8 520 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 TRIM44Q96DX7 344 aaPredicted RBP19.19■□□□□ 0.66
PTX4-201ENST00000293922 FAM83CQ9BQN1 747 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 C8orf33Q9H7E9 229 aaPredicted RBP19.19■□□□□ 0.66
PTX4-201ENST00000293922 KIF9Q9HAQ2 790 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 TRPC7Q9HCX4 862 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 SPTLC3Q9NUV7 552 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 NAGPAQ9UK23 515 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 GREB1Q4ZG55 1949 aa19.19■□□□□ 0.66
PTX4-201ENST00000293922 C2orf78A6NCI8 922 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 GZMAP12544 262 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 GFPT1Q06210 699 aaPredicted RBP19.18■□□□□ 0.66
PTX4-201ENST00000293922 CLEC16AQ2KHT3 1053 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 GOLGA7BQ2TAP0 167 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 DENND1BQ6P3S1 775 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 FAM35AQ86V20 835 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 ANKRD52Q8NB46 1076 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 TTC8Q8TAM2 541 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 MSANTD3Q96H12 275 aa19.18■□□□□ 0.66
PTX4-201ENST00000293922 PDCL3Q9H2J4 239 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms