RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RNF186Q9NXI6 227 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 KBTBD13C9JR72 458 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 TRPA1O75762 1119 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 TGDSO95455 350 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 TROVE2P10155 538 aaKnown RBP eCLIP26.06■■□□□ 1.76
ROM1-201ENST00000278833 ADRA1DP25100 572 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 PTPN9P43378 593 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 IGBP1P78318 339 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 SLC6A3Q01959 620 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 KRT81Q14533 505 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 UNC93AQ86WB7 457 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 IGDCC3Q8IVU1 814 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 TMEM130Q8N3G9 435 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 LRRC52Q8N7C0 313 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 TRDMT1O14717 391 aaKnown RBP26.06■■□□□ 1.76
ROM1-201ENST00000278833 C15orf59Q2T9L4 293 aaPredicted RBP26.06■■□□□ 1.76
ROM1-201ENST00000278833 SLC35F5Q8WV83 523 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 KHSRPQ92945 711 aaKnown RBP eCLIP26.06■■□□□ 1.76
ROM1-201ENST00000278833 PIWIL1Q96J94 861 aaKnown RBP26.06■■□□□ 1.76
ROM1-201ENST00000278833 KATNBL1Q9H079 304 aa26.06■■□□□ 1.76
ROM1-201ENST00000278833 H7C0C1 242 aa26.05■■□□□ 1.76
ROM1-201ENST00000278833 ECM2O94769 699 aaPredicted RBP26.05■■□□□ 1.76
ROM1-201ENST00000278833 MT-ND3P03897 115 aa26.05■■□□□ 1.76
ROM1-201ENST00000278833 ATP5OP48047 213 aa26.05■■□□□ 1.76
ROM1-201ENST00000278833 RPL34P49207 117 aaKnown RBP26.05■■□□□ 1.76
ROM1-201ENST00000278833 YWHAZP63104 245 aaKnown RBP26.05■■□□□ 1.76
ROM1-201ENST00000278833 PTK7Q13308 1070 aa26.05■■□□□ 1.76
ROM1-201ENST00000278833 SH3PXD2AQ5TCZ1 1133 aa26.05■■□□□ 1.76
ROM1-201ENST00000278833 CDKL3Q8IVW4 592 aaPredicted RBP26.05■■□□□ 1.76
ROM1-201ENST00000278833 C11orf84Q9BUA3 381 aaPredicted RBP26.05■■□□□ 1.76
ROM1-201ENST00000278833 TTLL3Q9Y4R7 772 aa26.05■■□□□ 1.76
ROM1-201ENST00000278833 KLF11O14901 512 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 ALDH1A1P00352 501 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 PRKCHP24723 683 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 SDC4P31431 198 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 SEPT7Q16181 437 aaKnown RBP26.04■■□□□ 1.76
ROM1-201ENST00000278833 TTC30AQ86WT1 665 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 CEP57Q86XR8 500 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 KIF12Q96FN5 646 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 KLC2Q9H0B6 622 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 ETNK1Q9HBU6 452 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 LNPEPQ9UIQ6 1025 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 SLC45A1Q9Y2W3 748 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 VTNP04004 478 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 INHBAP08476 426 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 CYP2C8P10632 490 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 MAGEA3P43357 314 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 RASSF2P50749 326 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 PCBP1Q15365 356 aaKnown RBP eCLIP26.04■■□□□ 1.76
ROM1-201ENST00000278833 ZBTB6Q15916 424 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 KIF2BQ8N4N8 673 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 AGAP11Q8TF27 550 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 BEGAINQ9BUH8 593 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 SNRNP25Q9BV90 132 aaKnown RBP26.04■■□□□ 1.76
ROM1-201ENST00000278833 PRDM16Q9HAZ2 1276 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 POPDC2Q9HBU9 364 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 CNTN3Q9P232 1028 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 IKBKGQ9Y6K9 419 aa26.04■■□□□ 1.76
ROM1-201ENST00000278833 ZFXP17010 805 aaPredicted RBP26.03■■□□□ 1.76
ROM1-201ENST00000278833 TPSB2P20231 275 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 CCNFP41002 786 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 BCAR1P56945 870 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 TAF1CQ15572 869 aaPredicted RBP26.03■■□□□ 1.76
ROM1-201ENST00000278833 TPSAB1Q15661 275 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 DPYSL2Q16555 572 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 KBTBD12Q3ZCT8 623 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 PPP1R26Q5T8A7 1209 aaPredicted RBP26.03■■□□□ 1.76
ROM1-201ENST00000278833 TLDC1Q6P9B6 456 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 NLRP9Q7RTR0 991 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 ZC3H18Q86VM9 953 aaKnown RBP26.03■■□□□ 1.76
ROM1-201ENST00000278833 SLC26A11Q86WA9 606 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 PCDH19Q8TAB3 1148 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 FAM172AQ8WUF8 416 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 NLRP7Q8WX94 980 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 CENPIQ92674 756 aaPredicted RBP26.03■■□□□ 1.76
ROM1-201ENST00000278833 SNX27Q96L92 541 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 TLE6Q9H808 572 aa26.03■■□□□ 1.76
ROM1-201ENST00000278833 LPXNO60711 386 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 ZBED1O96006 694 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 CCNA1P78396 465 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 TTC39BQ5VTQ0 682 aaPredicted RBP26.02■■□□□ 1.76
ROM1-201ENST00000278833 PMF1Q6P1K2 205 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 SH3TC2Q8TF17 1288 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 UTP4Q969X6 686 aaKnown RBP26.02■■□□□ 1.76
ROM1-201ENST00000278833 MRRFQ96E11 262 aaKnown RBP26.02■■□□□ 1.76
ROM1-201ENST00000278833 MANSC1Q9H8J5 431 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 RAB6BQ9NRW1 208 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 ETNK2Q9NVF9 386 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 CA12O43570 354 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 ATP11AP98196 1134 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 CDC42EP1Q00587 391 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 CRHR2Q13324 411 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 RAB6CQ53S08 254 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 SLC26A9Q7LBE3 791 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 RAB6CQ9H0N0 254 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 NOP53Q9NZM5 478 aaKnown RBP26.02■■□□□ 1.76
ROM1-201ENST00000278833 SLC17A7Q9P2U7 560 aa26.02■■□□□ 1.76
ROM1-201ENST00000278833 SCN1AP35498 2009 aa26.01■■□□□ 1.76
ROM1-201ENST00000278833 KCNN4O15554 427 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 PAPSS1O43252 624 aaPredicted RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms