RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 HLA-DQA1Q5Y7H0 255 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 MACC1Q6ZN28 852 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 ATG16L2Q8NAA4 619 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 GDPD5Q8WTR4 605 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 RUBCNQ92622 972 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 RBBP8Q99708 897 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 MYOZ2Q9NPC6 264 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 PCDH12Q9NPG4 1184 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 C12orf4Q9NQ89 552 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 NEU2Q9Y3R4 380 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 TTC26A0AVF1 554 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 TBC1D3BA6NDS4 549 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 F8W810 466 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 GGPS1O95749 300 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 PRKCBP05771 671 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 EIF4BP23588 611 aaKnown RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 STAT5BP51692 787 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 ZNF177Q13360 481 aaPredicted RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 RUNDC3AQ59EK9 446 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 ARL6IP4Q66PJ3 421 aaKnown RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 PPP1R18Q6NYC8 613 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 MARK2Q7KZI7 788 aaKnown RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 C7orf61Q8IZ16 206 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 CENPLQ8N0S6 344 aaPredicted RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 LXNQ9BS40 222 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 COMMD9Q9P000 198 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 LRCH1Q9Y2L9 728 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 SPATA31D3P0C874 917 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 SPATA31D4Q6ZUB0 917 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 REXO1L1PQ8IX06 675 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 SLC30A5Q8TAD4 765 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 UTP15Q8TED0 518 aaKnown RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 NACC2Q96BF6 587 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 SLITRK1Q96PX8 696 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 TMEM138Q9NPI0 162 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 RPH3AQ9Y2J0 694 aaPredicted RBP11.43□□□□□ -0.58
MSH6-201ENST00000234420 GCC2Q8IWJ2 1684 aa11.43□□□□□ -0.58
MSH6-201ENST00000234420 LOC100506127A0A0U1RQW1 187 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 FOXN3O00409 490 aaPredicted RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 B3GAT3O94766 335 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 TRAP1Q12931 704 aaKnown RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 SMTNL2Q2TAL5 461 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 PSMA8Q8TAA3 256 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 BLOC1S5Q8TDH9 187 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 FAM192AQ9GZU8 254 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 RNF19AQ9NV58 838 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 ATP10DQ9P241 1426 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 BAIAP2Q9UQB8 552 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 PMF1-BGLAPU3KQ54 211 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 DSG3P32926 999 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 MAGEA2P43356 314 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 ADAM17P78536 824 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 DDR2Q16832 855 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 SEZ6Q53EL9 994 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 UBA2Q9UBT2 640 aaPredicted RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 SNTNA6NMZ2 147 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 WEE2P0C1S8 567 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 CYP2C9P11712 490 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 PROSER1Q86XN7 944 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 BRSK2Q8IWQ3 736 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 ATL2Q8NHH9 583 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 CPA5Q8WXQ8 436 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 MRPS31Q92665 395 aaKnown RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 SLC9A7Q96T83 725 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 COLEC11Q9BWP8 271 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 NUAK2Q9H093 628 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 TRPC4Q9UBN4 977 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 ANAPC2Q9UJX6 822 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 ING4Q9UNL4 249 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 SPEF1Q9Y4P9 236 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 ZNF608Q9ULD9 1512 aaPredicted RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 LGR5O75473 907 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 SUZ12Q15022 739 aaKnown RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 EIF2S3LQ2VIR3 472 aaKnown RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 NDUFAF6Q330K2 333 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 GALNTL6Q49A17 601 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 PPM1LQ5SGD2 360 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 BARGINQ6ZT62 677 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 GET4Q7L5D6 327 aaPredicted RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 RHOT1Q8IXI2 618 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 SCFD2Q8WU76 684 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 FBXO32Q969P5 355 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 C2orf40Q9H1Z8 148 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 RBM12Q9NTZ6 932 aaKnown RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 ATP5JP18859 108 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 RRM2P31350 389 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 CCL23P55773 120 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 EDRF1Q3B7T1 1238 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 TRIM74Q86UV6 250 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 TRIM73Q86UV7 250 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 KCNB2Q92953 911 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 COL26A1Q96A83 441 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 ADI1Q9BV57 179 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 KCNF1Q9H3M0 494 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 GULP1Q9UBP9 304 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 FBXO9Q9UK97 447 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms