RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C RPL38P49167 78 aaKnown RBP1.75□□□□□ -2.13
RPA43YOR340C YPR153WQ06537 140 aa1.73□□□□□ -2.13
RPA43YOR340C YHR073W-AP0C5N7 58 aa1.72□□□□□ -2.13
RPA43YOR340C YAR064WP39563 99 aa1.71□□□□□ -2.14
RPA43YOR340C YGR164WP53291 111 aa1.71□□□□□ -2.14
RPA43YOR340C RPL36AP05745 100 aaPredicted RBP1.7□□□□□ -2.14
RPA43YOR340C YEL014CP39999 101 aa1.7□□□□□ -2.14
RPA43YOR340C YER187WP40102 141 aa1.7□□□□□ -2.14
RPA43YOR340C ATX1P38636 73 aa1.69□□□□□ -2.14
RPA43YOR340C YOR316C-AQ3E806 69 aa1.69□□□□□ -2.14
RPA43YOR340C YJR128WP47162 119 aa1.68□□□□□ -2.14
RPA43YOR340C YCR085WP25650 117 aa1.67□□□□□ -2.14
RPA43YOR340C YLR285C-AQ3E771 56 aa1.67□□□□□ -2.14
RPA43YOR340C OST5Q92316 86 aa1.67□□□□□ -2.14
RPA43YOR340C YFL065CP43539 102 aa1.66□□□□□ -2.14
RPA43YOR340C YPR203WQ08994 102 aa1.66□□□□□ -2.14
RPA43YOR340C YJL009WP47078 108 aa1.64□□□□□ -2.15
RPA43YOR340C YOL013W-AP0C272 63 aaPredicted RBP1.63□□□□□ -2.15
RPA43YOR340C YGL014C-AP0C5N1 53 aa1.63□□□□□ -2.15
RPA43YOR340C YSY6P38374 65 aa1.63□□□□□ -2.15
RPA43YOR340C Q0017Q9ZZX8 53 aa1.63□□□□□ -2.15
RPA43YOR340C YDR210WQ03482 75 aa1.62□□□□□ -2.15
RPA43YOR340C YFL041W-AQ3E817 63 aa1.62□□□□□ -2.15
RPA43YOR340C YMR122CQ03879 124 aa1.61□□□□□ -2.15
RPA43YOR340C YLR255CO13574 117 aa1.6□□□□□ -2.15
RPA43YOR340C YBR016WP38216 128 aa1.6□□□□□ -2.15
RPA43YOR340C NOP10Q6Q547 58 aaPredicted RBP1.6□□□□□ -2.15
RPA43YOR340C YIL102CP40488 101 aa1.59□□□□□ -2.15
RPA43YOR340C YDR246W-AQ3E763 66 aa1.59□□□□□ -2.15
RPA43YOR340C YGR146C-AQ8TGT9 53 aa1.59□□□□□ -2.15
RPA43YOR340C AIM4P38305 123 aaPredicted RBP1.58□□□□□ -2.16
RPA43YOR340C YDR119W-AQ2V2P9 66 aa1.58□□□□□ -2.16
RPA43YOR340C YOR314WQ12506 109 aa1.57□□□□□ -2.16
RPA43YOR340C YOL166W-AQ8TGJ1 51 aa1.57□□□□□ -2.16
RPA43YOR340C YKL065W-AQ2V2P2 73 aa1.56□□□□□ -2.16
RPA43YOR340C YCR095W-AQ3E787 52 aa1.56□□□□□ -2.16
RPA43YOR340C YPL038W-AQ3E7B4 63 aa1.56□□□□□ -2.16
RPA43YOR340C RPS30AP0CX33 63 aaKnown RBP1.55□□□□□ -2.16
RPA43YOR340C RPS30BP0CX34 63 aaKnown RBP1.55□□□□□ -2.16
RPA43YOR340C TOM6P33448 61 aa1.53□□□□□ -2.16
RPA43YOR340C YIL156W-BQ2V2P4 73 aa1.52□□□□□ -2.17
RPA43YOR340C YBL044WP38194 122 aa1.51□□□□□ -2.17
RPA43YOR340C OLI1P61829 76 aa1.51□□□□□ -2.17
RPA43YOR340C YDR182W-AQ3E796 67 aa1.49□□□□□ -2.17
RPA43YOR340C YML054C-AQ3E809 52 aa1.47□□□□□ -2.17
RPA43YOR340C MRX7P53869 86 aa1.46□□□□□ -2.18
RPA43YOR340C YBR201C-AQ2V2Q3 67 aa1.46□□□□□ -2.18
RPA43YOR340C SDH6Q3E785 79 aa1.45□□□□□ -2.18
RPA43YOR340C RPL37AP49166 88 aaKnown RBP1.43□□□□□ -2.18
RPA43YOR340C YMR001C-AQ8TGS9 76 aa1.42□□□□□ -2.18
RPA43YOR340C HHY1P39982 102 aa1.4□□□□□ -2.19
RPA43YOR340C RPS29BP41058 56 aaKnown RBP1.4□□□□□ -2.19
RPA43YOR340C RPS29AP41057 56 aaKnown RBP1.39□□□□□ -2.19
RPA43YOR340C HUB1Q6Q546 73 aa1.39□□□□□ -2.19
RPA43YOR340C YOR394C-AQ8TGJ0 55 aa1.39□□□□□ -2.19
RPA43YOR340C YER188C-AP0C0V2 99 aa1.38□□□□□ -2.19
RPA43YOR340C ATP17Q06405 101 aa1.34□□□□□ -2.19
RPA43YOR340C YCR108CQ3E819 63 aa1.32□□□□□ -2.2
RPA43YOR340C YBR072C-AQ3E794 53 aa1.31□□□□□ -2.2
RPA43YOR340C YLR157W-EP0CF00 54 aa1.2□□□□□ -2.22
RPA43YOR340C YOL164W-AQ3E7A5 60 aa1.2□□□□□ -2.22
RPA43YOR340C YOR072W-BQ3E832 53 aa1.2□□□□□ -2.22
RPA43YOR340C YHR050W-AQ05451 56 aa1□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 18.7 ms