RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	YHL005C	P38752	130 aa		1.21	□□□□□ -2.22
PMS1	YNL082W	COX7	P10174	60 aa		1.2	□□□□□ -2.22
PMS1	YNL082W	YGL194C-A	Q2V2P6	80 aa		1.2	□□□□□ -2.22
PMS1	YNL082W	RPS29B	P41058	56 aa	Known RBP	1.2	□□□□□ -2.22
PMS1	YNL082W	RPA12	P32529	125 aa	Known RBP	1.19	□□□□□ -2.22
PMS1	YNL082W	DDR2	P89113	61 aa		1.19	□□□□□ -2.22
PMS1	YNL082W	VMA9	Q3E7B6	73 aa		1.19	□□□□□ -2.22
PMS1	YNL082W	ICY1	Q04329	127 aa		1.19	□□□□□ -2.22
PMS1	YNL082W	YOL164W-A	Q3E7A5	60 aa		1.19	□□□□□ -2.22
PMS1	YNL082W	YLL006W-A	Q3E814	58 aa		1.19	□□□□□ -2.22
PMS1	YNL082W	YBR230W-A	Q3E762	66 aa		1.18	□□□□□ -2.22
PMS1	YNL082W	YOL097W-A	Q3E7Y9	61 aa		1.16	□□□□□ -2.22
PMS1	YNL082W	YHR073W-A	P0C5N7	58 aa		1.14	□□□□□ -2.23
PMS1	YNL082W	PAU17	Q12370	124 aa		1.14	□□□□□ -2.23
PMS1	YNL082W	YJL127C-B	Q3E828	52 aa		1.14	□□□□□ -2.23
PMS1	YNL082W	RSM18	P40033	138 aa		1.13	□□□□□ -2.23
PMS1	YNL082W	YLR157W-D	P0CE99	70 aa		1.12	□□□□□ -2.23
PMS1	YNL082W	BSC4	P53841	131 aa		1.12	□□□□□ -2.23
PMS1	YNL082W	YBR072C-A	Q3E794	53 aa		1.11	□□□□□ -2.23
PMS1	YNL082W	YML054C-A	Q3E809	52 aa		1.11	□□□□□ -2.23
PMS1	YNL082W	YDL022C-A	P0C5L6	82 aa		1.1	□□□□□ -2.23
PMS1	YNL082W	PAU23	Q07987	124 aa		1.09	□□□□□ -2.24
PMS1	YNL082W	YBR016W	P38216	128 aa		1.05	□□□□□ -2.24
PMS1	YNL082W	EDC1	P53080	175 aa	Predicted RBP	1.03	□□□□□ -2.24
PMS1	YNL082W	YBR201C-A	Q2V2Q3	67 aa		1.02	□□□□□ -2.25
PMS1	YNL082W	YCR085W	P25650	117 aa		1.01	□□□□□ -2.25
PMS1	YNL082W	YJL133C-A	Q3E7A3	74 aa		0.99	□□□□□ -2.25
PMS1	YNL082W	YJR107C-A	P0CT86	78 aa		0.98	□□□□□ -2.25
PMS1	YNL082W	ATP18	P81450	59 aa		0.98	□□□□□ -2.25
PMS1	YNL082W	YOR316C-A	Q3E806	69 aa		0.97	□□□□□ -2.25
PMS1	YNL082W	YFR009W-A	P0C5M9	85 aa		0.96	□□□□□ -2.26
PMS1	YNL082W	YDR182W-A	Q3E796	67 aa		0.94	□□□□□ -2.26
PMS1	YNL082W	YIL156W-B	Q2V2P4	73 aa		0.94	□□□□□ -2.26
PMS1	YNL082W	PAI3	P01094	68 aa		0.91	□□□□□ -2.26
PMS1	YNL082W	YIL102C-A	Q2V2P5	75 aa		0.91	□□□□□ -2.26
PMS1	YNL082W	YFL041W-A	Q3E817	63 aa		0.91	□□□□□ -2.26
PMS1	YNL082W	YNL198C	P40166	100 aa		0.91	□□□□□ -2.26
PMS1	YNL082W	YSY6	P38374	65 aa		0.9	□□□□□ -2.26
PMS1	YNL082W	NOP10	Q6Q547	58 aa	Predicted RBP	0.9	□□□□□ -2.27
PMS1	YNL082W	YDR381C-A	Q3E6R5	114 aa		0.88	□□□□□ -2.27
PMS1	YNL082W	YGR146C-A	Q8TGT9	53 aa		0.87	□□□□□ -2.27
PMS1	YNL082W	SSS1	P35179	80 aa		0.86	□□□□□ -2.27
PMS1	YNL082W	YIL134C-A	Q45U18	67 aa		0.86	□□□□□ -2.27
PMS1	YNL082W	YOR314W	Q12506	109 aa		0.85	□□□□□ -2.27
PMS1	YNL082W	RPL38	P49167	78 aa	Known RBP	0.84	□□□□□ -2.27
PMS1	YNL082W	HUB1	Q6Q546	73 aa		0.84	□□□□□ -2.27
PMS1	YNL082W	OLI1	P61829	76 aa		0.83	□□□□□ -2.28
PMS1	YNL082W	YKL065W-A	Q2V2P2	73 aa		0.82	□□□□□ -2.28
PMS1	YNL082W	YDR119W-A	Q2V2P9	66 aa		0.82	□□□□□ -2.28
PMS1	YNL082W	TOM6	P33448	61 aa		0.81	□□□□□ -2.28
PMS1	YNL082W	YBL044W	P38194	122 aa		0.81	□□□□□ -2.28
PMS1	YNL082W	YOR072W-B	Q3E832	53 aa		0.8	□□□□□ -2.28
PMS1	YNL082W	ATP17	Q06405	101 aa		0.78	□□□□□ -2.28
PMS1	YNL082W	SDH6	Q3E785	79 aa		0.77	□□□□□ -2.29
PMS1	YNL082W	RPS30A	P0CX33	63 aa	Known RBP	0.77	□□□□□ -2.29
PMS1	YNL082W	RPS30B	P0CX34	63 aa	Known RBP	0.77	□□□□□ -2.29
PMS1	YNL082W	YHR050W-A	Q05451	56 aa		0.75	□□□□□ -2.29
PMS1	YNL082W	YOR394C-A	Q8TGJ0	55 aa		0.75	□□□□□ -2.29
PMS1	YNL082W	ATX1	P38636	73 aa		0.74	□□□□□ -2.29
PMS1	YNL082W	YOL166W-A	Q8TGJ1	51 aa		0.69	□□□□□ -2.3
PMS1	YNL082W	YMR001C-A	Q8TGS9	76 aa		0.67	□□□□□ -2.3
PMS1	YNL082W	YDR246W-A	Q3E763	66 aa		0.64	□□□□□ -2.31
PMS1	YNL082W	YCR108C	Q3E819	63 aa		0.54	□□□□□ -2.32

Retrieved 63 of 5,963 RNA–protein pairs in 52.2 ms