RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W Q0032Q9ZZX7 96 aa4.16□□□□□ -1.74
HDA1YNL021W YDR010CQ12426 110 aa4.15□□□□□ -1.75
HDA1YNL021W BSC4P53841 131 aa4.13□□□□□ -1.75
HDA1YNL021W YLR307C-AQ3E825 87 aa4.13□□□□□ -1.75
HDA1YNL021W YIL156W-BQ2V2P4 73 aa4.13□□□□□ -1.75
HDA1YNL021W YJR107C-AP0CT86 78 aa4.12□□□□□ -1.75
HDA1YNL021W YDR034C-AP0C289 58 aa4.12□□□□□ -1.75
HDA1YNL021W YBR230W-AQ3E762 66 aa4.12□□□□□ -1.75
HDA1YNL021W YDR246W-AQ3E763 66 aa4.11□□□□□ -1.75
HDA1YNL021W YJL127C-BQ3E828 52 aa4.1□□□□□ -1.75
HDA1YNL021W YNL042W-BQ3E7Z2 85 aa4.1□□□□□ -1.75
HDA1YNL021W NOP10Q6Q547 58 aaPredicted RBP4.09□□□□□ -1.75
HDA1YNL021W ATP18P81450 59 aa4.09□□□□□ -1.76
HDA1YNL021W LCL2Q08045 131 aa4.08□□□□□ -1.76
HDA1YNL021W YDR210WQ03482 75 aa4.06□□□□□ -1.76
HDA1YNL021W DDR2P89113 61 aa4.04□□□□□ -1.76
HDA1YNL021W YFR009W-AP0C5M9 85 aa4.03□□□□□ -1.76
HDA1YNL021W LCL1Q02786 101 aa4□□□□□ -1.77
HDA1YNL021W YOR072WQ08486 104 aa3.99□□□□□ -1.77
HDA1YNL021W EDC1P53080 175 aaPredicted RBP3.98□□□□□ -1.77
HDA1YNL021W RPL38P49167 78 aaKnown RBP3.96□□□□□ -1.78
HDA1YNL021W YHR213W-BQ8TGK1 99 aa3.96□□□□□ -1.78
HDA1YNL021W YJL133C-AQ3E7A3 74 aa3.94□□□□□ -1.78
HDA1YNL021W YDR182W-AQ3E796 67 aa3.91□□□□□ -1.78
HDA1YNL021W YLR255CO13574 117 aa3.9□□□□□ -1.79
HDA1YNL021W RPS30AP0CX33 63 aaKnown RBP3.89□□□□□ -1.79
HDA1YNL021W RPS30BP0CX34 63 aaKnown RBP3.89□□□□□ -1.79
HDA1YNL021W ATP17Q06405 101 aa3.85□□□□□ -1.79
HDA1YNL021W YLR157W-DP0CE99 70 aa3.84□□□□□ -1.79
HDA1YNL021W YOL097W-AQ3E7Y9 61 aa3.84□□□□□ -1.79
HDA1YNL021W YBR201C-AQ2V2Q3 67 aa3.82□□□□□ -1.8
HDA1YNL021W YOL166W-AQ8TGJ1 51 aa3.82□□□□□ -1.8
HDA1YNL021W YNL122CP53921 115 aaPredicted RBP3.81□□□□□ -1.8
HDA1YNL021W HUB1Q6Q546 73 aa3.8□□□□□ -1.8
HDA1YNL021W YJL009WP47078 108 aa3.78□□□□□ -1.8
HDA1YNL021W YAR064WP39563 99 aa3.77□□□□□ -1.81
HDA1YNL021W MDN1Q12019 4910 aaKnown RBP3.76□□□□□ -1.81
HDA1YNL021W YOL013W-AP0C272 63 aaPredicted RBP3.74□□□□□ -1.81
HDA1YNL021W YIL102CP40488 101 aa3.73□□□□□ -1.81
HDA1YNL021W SDH6Q3E785 79 aa3.71□□□□□ -1.82
HDA1YNL021W YHR073W-AP0C5N7 58 aa3.7□□□□□ -1.82
HDA1YNL021W COX7P10174 60 aa3.67□□□□□ -1.82
HDA1YNL021W YMR001C-AQ8TGS9 76 aa3.62□□□□□ -1.83
HDA1YNL021W YJR128WP47162 119 aa3.6□□□□□ -1.83
HDA1YNL021W YOR316C-AQ3E806 69 aa3.59□□□□□ -1.83
HDA1YNL021W YGR146C-AQ8TGT9 53 aa3.56□□□□□ -1.84
HDA1YNL021W YBR016WP38216 128 aa3.46□□□□□ -1.86
HDA1YNL021W HHY1P39982 102 aa3.46□□□□□ -1.86
HDA1YNL021W OLI1P61829 76 aa3.44□□□□□ -1.86
HDA1YNL021W RPL37BP51402 88 aaKnown RBP3.4□□□□□ -1.87
HDA1YNL021W YOR394C-AQ8TGJ0 55 aa3.38□□□□□ -1.87
HDA1YNL021W YBR072C-AQ3E794 53 aa3.37□□□□□ -1.87
HDA1YNL021W Q0017Q9ZZX8 53 aa3.35□□□□□ -1.87
HDA1YNL021W YML054C-AQ3E809 52 aa3.22□□□□□ -1.89
HDA1YNL021W YBL044WP38194 122 aa3.2□□□□□ -1.9
HDA1YNL021W YCR108CQ3E819 63 aa3.1□□□□□ -1.91
HDA1YNL021W RPL37AP49166 88 aaKnown RBP3.07□□□□□ -1.92
HDA1YNL021W YOL164W-AQ3E7A5 60 aa3.01□□□□□ -1.93
HDA1YNL021W YLR157W-EP0CF00 54 aa2.95□□□□□ -1.94
HDA1YNL021W YOR072W-BQ3E832 53 aa2.94□□□□□ -1.94
HDA1YNL021W RPS29BP41058 56 aaKnown RBP2.69□□□□□ -1.98
HDA1YNL021W RPS29AP41057 56 aaKnown RBP2.58□□□□□ -2
HDA1YNL021W YHR050W-AQ05451 56 aa2.41□□□□□ -2.02
Retrieved 63 of 5,963 RNA–protein pairs in 68.2 ms