RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YJR107C-AP0CT86 78 aa1.49□□□□□ -2.17
CUS1YMR240C YDR246W-AQ3E763 66 aa1.49□□□□□ -2.17
CUS1YMR240C HUB1Q6Q546 73 aa1.49□□□□□ -2.17
CUS1YMR240C YOR032W-AQ8TGS1 66 aa1.49□□□□□ -2.17
CUS1YMR240C YNL190WP53872 204 aa1.48□□□□□ -2.17
CUS1YMR240C YDR182W-AQ3E796 67 aa1.48□□□□□ -2.17
CUS1YMR240C YBR056W-AI2HB52 66 aa1.46□□□□□ -2.18
CUS1YMR240C SIP18P50263 79 aa1.46□□□□□ -2.18
CUS1YMR240C MEC1P38111 2368 aa1.46□□□□□ -2.18
CUS1YMR240C RPL39P04650 51 aa1.45□□□□□ -2.18
CUS1YMR240C EDC1P53080 175 aaPredicted RBP1.45□□□□□ -2.18
CUS1YMR240C YMR105W-AQ8TGS8 64 aa1.45□□□□□ -2.18
CUS1YMR240C YGL258W-AQ3E740 77 aa1.44□□□□□ -2.18
CUS1YMR240C YIL134C-AQ45U18 67 aa1.44□□□□□ -2.18
CUS1YMR240C TOR1P35169 2470 aa1.44□□□□□ -2.18
CUS1YMR240C NUM1Q00402 2748 aa1.44□□□□□ -2.18
CUS1YMR240C TOM7P53507 60 aa1.43□□□□□ -2.18
CUS1YMR240C YOL164W-AQ3E7A5 60 aa1.43□□□□□ -2.18
CUS1YMR240C UTP20P35194 2493 aaKnown RBP1.41□□□□□ -2.18
CUS1YMR240C RPS30AP0CX33 63 aaKnown RBP1.4□□□□□ -2.19
CUS1YMR240C RPS30BP0CX34 63 aaKnown RBP1.4□□□□□ -2.19
CUS1YMR240C YGR025WP53216 100 aa1.4□□□□□ -2.19
CUS1YMR240C YOR011W-AQ3E807 68 aa1.39□□□□□ -2.19
CUS1YMR240C YKL023C-AQ2V2P3 75 aa1.38□□□□□ -2.19
CUS1YMR240C YBL039W-BP0C268 59 aa1.37□□□□□ -2.19
CUS1YMR240C YBR200W-AQ3E755 54 aa1.37□□□□□ -2.19
CUS1YMR240C YLR342W-AQ3E810 57 aa1.37□□□□□ -2.19
CUS1YMR240C Q0297Q9ZZV8 51 aa1.37□□□□□ -2.19
CUS1YMR240C HOR7Q05827 59 aa1.34□□□□□ -2.2
CUS1YMR240C YOL166W-AQ8TGJ1 51 aa1.34□□□□□ -2.2
CUS1YMR240C YBR016WP38216 128 aa1.33□□□□□ -2.2
CUS1YMR240C TOS6P48560 102 aa1.33□□□□□ -2.2
CUS1YMR240C YFR009W-AP0C5M9 85 aa1.32□□□□□ -2.2
CUS1YMR240C CUP1-1P0CX80 61 aa1.32□□□□□ -2.2
CUS1YMR240C CUP1-2P0CX81 61 aa1.32□□□□□ -2.2
CUS1YMR240C OLI1P61829 76 aa1.32□□□□□ -2.2
CUS1YMR240C YOR394C-AQ8TGJ0 55 aa1.32□□□□□ -2.2
CUS1YMR240C YOR008C-AQ3E7B9 74 aa1.31□□□□□ -2.2
CUS1YMR240C DYN1P36022 4092 aa1.31□□□□□ -2.2
CUS1YMR240C YMR001C-AQ8TGS9 76 aa1.3□□□□□ -2.2
CUS1YMR240C RPS29BP41058 56 aaKnown RBP1.29□□□□□ -2.2
CUS1YMR240C PMP3P87284 55 aa1.27□□□□□ -2.21
CUS1YMR240C YLR157W-DP0CE99 70 aa1.25□□□□□ -2.21
CUS1YMR240C YLL006W-AQ3E814 58 aa1.25□□□□□ -2.21
CUS1YMR240C YBL044WP38194 122 aa1.23□□□□□ -2.21
CUS1YMR240C YLL066W-BQ8TGJ7 56 aa1.23□□□□□ -2.21
CUS1YMR240C RPL29P05747 59 aaPredicted RBP1.21□□□□□ -2.22
CUS1YMR240C YBR230W-AQ3E762 66 aa1.21□□□□□ -2.22
CUS1YMR240C YPR010C-AA5Z2X5 72 aa1.19□□□□□ -2.22
CUS1YMR240C YJL127C-BQ3E828 52 aa1.18□□□□□ -2.22
CUS1YMR240C YDR034C-AP0C289 58 aa1.15□□□□□ -2.22
CUS1YMR240C DDR2P89113 61 aa1.15□□□□□ -2.22
CUS1YMR240C YJL133C-AQ3E7A3 74 aa1.15□□□□□ -2.22
CUS1YMR240C MDN1Q12019 4910 aaKnown RBP1.11□□□□□ -2.23
CUS1YMR240C YCR108CQ3E819 63 aa1.06□□□□□ -2.24
CUS1YMR240C YGR146C-AQ8TGT9 53 aa1.06□□□□□ -2.24
CUS1YMR240C YHR073W-AP0C5N7 58 aa1.05□□□□□ -2.24
CUS1YMR240C YOR316C-AQ3E806 69 aa1.05□□□□□ -2.24
CUS1YMR240C RPS29AP41057 56 aaKnown RBP0.9□□□□□ -2.26
CUS1YMR240C Q0017Q9ZZX8 53 aa0.89□□□□□ -2.27
CUS1YMR240C YML054C-AQ3E809 52 aa0.87□□□□□ -2.27
CUS1YMR240C YOR072W-BQ3E832 53 aa0.86□□□□□ -2.27
CUS1YMR240C YHR050W-AQ05451 56 aa0.66□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 70.1 ms