RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C Q0032Q9ZZX7 96 aa3.19□□□□□ -1.9
NUP116YMR047C YPR195CQ06594 109 aa3.19□□□□□ -1.9
NUP116YMR047C YBR027CP38220 110 aa3.19□□□□□ -1.9
NUP116YMR047C HUB1Q6Q546 73 aa3.19□□□□□ -1.9
NUP116YMR047C ATP17Q06405 101 aa3.18□□□□□ -1.9
NUP116YMR047C YGL014C-AP0C5N1 53 aa3.17□□□□□ -1.9
NUP116YMR047C YLL006W-AQ3E814 58 aa3.17□□□□□ -1.9
NUP116YMR047C YDR034C-AP0C289 58 aa3.17□□□□□ -1.9
NUP116YMR047C YLR307C-AQ3E825 87 aa3.17□□□□□ -1.9
NUP116YMR047C YOL013W-AP0C272 63 aaPredicted RBP3.16□□□□□ -1.9
NUP116YMR047C SDH6Q3E785 79 aa3.16□□□□□ -1.9
NUP116YMR047C YDR210WQ03482 75 aa3.14□□□□□ -1.91
NUP116YMR047C YGL041C-BQ3E750 60 aa3.14□□□□□ -1.91
NUP116YMR047C YHR125WP38831 101 aa3.14□□□□□ -1.91
NUP116YMR047C YHR213W-BQ8TGK1 99 aa3.13□□□□□ -1.91
NUP116YMR047C YJR085CP47131 105 aaKnown RBP3.12□□□□□ -1.91
NUP116YMR047C COX14P39103 70 aa3.11□□□□□ -1.91
NUP116YMR047C YLR255CO13574 117 aa3.1□□□□□ -1.91
NUP116YMR047C MVB12P42939 101 aa3.1□□□□□ -1.91
NUP116YMR047C YJL133C-AQ3E7A3 74 aa3.1□□□□□ -1.91
NUP116YMR047C YEL014CP39999 101 aa3.09□□□□□ -1.91
NUP116YMR047C YBR201C-AQ2V2Q3 67 aa3.09□□□□□ -1.91
NUP116YMR047C YHR032W-AP0C5N6 59 aa3.09□□□□□ -1.91
NUP116YMR047C RPL29P05747 59 aaPredicted RBP3.09□□□□□ -1.92
NUP116YMR047C YBL039W-BP0C268 59 aa3.06□□□□□ -1.92
NUP116YMR047C YOR072WQ08486 104 aa3.06□□□□□ -1.92
NUP116YMR047C YDL012CQ12489 107 aa3.05□□□□□ -1.92
NUP116YMR047C COX8P04039 78 aa3.04□□□□□ -1.92
NUP116YMR047C YAR064WP39563 99 aa3.01□□□□□ -1.93
NUP116YMR047C YNL162W-AQ3E7A8 72 aa3□□□□□ -1.93
NUP116YMR047C YJL127C-BQ3E828 52 aa2.99□□□□□ -1.93
NUP116YMR047C YFL067WP43537 175 aa2.98□□□□□ -1.93
NUP116YMR047C YAL067W-AQ8TGK6 75 aa2.97□□□□□ -1.93
NUP116YMR047C YJR128WP47162 119 aa2.97□□□□□ -1.93
NUP116YMR047C YBR230W-AQ3E762 66 aa2.97□□□□□ -1.93
NUP116YMR047C YHR007C-AQ07074 71 aa2.93□□□□□ -1.94
NUP116YMR047C YMR230W-AQ3E7B5 62 aa2.93□□□□□ -1.94
NUP116YMR047C YCR108CQ3E819 63 aa2.9□□□□□ -1.95
NUP116YMR047C YOL097W-AQ3E7Y9 61 aa2.87□□□□□ -1.95
NUP116YMR047C YOR394C-AQ8TGJ0 55 aa2.86□□□□□ -1.95
NUP116YMR047C YBL044WP38194 122 aa2.86□□□□□ -1.95
NUP116YMR047C DDR2P89113 61 aa2.86□□□□□ -1.95
NUP116YMR047C YJL144WP47009 104 aa2.81□□□□□ -1.96
NUP116YMR047C YGR146C-AQ8TGT9 53 aa2.8□□□□□ -1.96
NUP116YMR047C COX7P10174 60 aa2.79□□□□□ -1.96
NUP116YMR047C RPL37BP51402 88 aaKnown RBP2.79□□□□□ -1.96
NUP116YMR047C OLI1P61829 76 aa2.7□□□□□ -1.98
NUP116YMR047C YOR316C-AQ3E806 69 aa2.7□□□□□ -1.98
NUP116YMR047C YBR016WP38216 128 aa2.68□□□□□ -1.98
NUP116YMR047C YHR073W-AP0C5N7 58 aa2.67□□□□□ -1.98
NUP116YMR047C Q0017Q9ZZX8 53 aa2.67□□□□□ -1.98
NUP116YMR047C HHY1P39982 102 aa2.57□□□□□ -2
NUP116YMR047C YJL009WP47078 108 aa2.53□□□□□ -2
NUP116YMR047C YBR072C-AQ3E794 53 aa2.47□□□□□ -2.01
NUP116YMR047C RPL37AP49166 88 aaKnown RBP2.45□□□□□ -2.02
NUP116YMR047C YOL164W-AQ3E7A5 60 aa2.4□□□□□ -2.03
NUP116YMR047C YOR072W-BQ3E832 53 aa2.38□□□□□ -2.03
NUP116YMR047C YML054C-AQ3E809 52 aa2.37□□□□□ -2.03
NUP116YMR047C RPS29BP41058 56 aaKnown RBP2.35□□□□□ -2.03
NUP116YMR047C YHR086W-AQ3E746 53 aa2.35□□□□□ -2.03
NUP116YMR047C RPS29AP41057 56 aaKnown RBP2.31□□□□□ -2.04
NUP116YMR047C YLR157W-EP0CF00 54 aa2.09□□□□□ -2.07
NUP116YMR047C YHR050W-AQ05451 56 aa1.83□□□□□ -2.12
Retrieved 63 of 5,963 RNA–protein pairs in 33.3 ms