RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C Q0032Q9ZZX7 96 aa2.08□□□□□ -2.08
VPS33YLR396C RPL33AP05744 107 aaKnown RBP2.06□□□□□ -2.08
VPS33YLR396C YJL197C-AP0C5P0 93 aa2.06□□□□□ -2.08
VPS33YLR396C YHR212W-AP0CX91 67 aa2.06□□□□□ -2.08
VPS33YLR396C RPL33BP41056 107 aaKnown RBP2.06□□□□□ -2.08
VPS33YLR396C YFR032C-BQ8TGU2 87 aa2.06□□□□□ -2.08
VPS33YLR396C SNA2P56508 79 aa2.05□□□□□ -2.08
VPS33YLR396C SOM1Q05676 74 aa2.05□□□□□ -2.08
VPS33YLR396C YLL066W-BQ8TGJ7 56 aa2.04□□□□□ -2.08
VPS33YLR396C YBL008W-AQ3E821 79 aa2.03□□□□□ -2.08
VPS33YLR396C YGL014C-AP0C5N1 53 aa2.02□□□□□ -2.09
VPS33YLR396C SGF11Q03067 99 aa2.02□□□□□ -2.09
VPS33YLR396C FYV12Q08559 129 aa2.02□□□□□ -2.09
VPS33YLR396C YJR128WP47162 119 aa2.02□□□□□ -2.09
VPS33YLR396C Q0297Q9ZZV8 51 aa2.01□□□□□ -2.09
VPS33YLR396C RTC6O14464 93 aa2□□□□□ -2.09
VPS33YLR396C YGL041C-BQ3E750 60 aa2□□□□□ -2.09
VPS33YLR396C TOR2P32600 2474 aaKnown RBP2□□□□□ -2.09
VPS33YLR396C YBR201C-AQ2V2Q3 67 aa2□□□□□ -2.09
VPS33YLR396C TEL1P38110 2787 aa1.99□□□□□ -2.09
VPS33YLR396C YLR255CO13574 117 aa1.98□□□□□ -2.09
VPS33YLR396C YBR056W-AI2HB52 66 aa1.98□□□□□ -2.09
VPS33YLR396C YGR146C-AQ8TGT9 53 aa1.98□□□□□ -2.09
VPS33YLR396C YOL097W-AQ3E7Y9 61 aa1.97□□□□□ -2.09
VPS33YLR396C MEC1P38111 2368 aa1.96□□□□□ -2.1
VPS33YLR396C YCL042WP25572 119 aa1.95□□□□□ -2.1
VPS33YLR396C COX8P04039 78 aa1.95□□□□□ -2.1
VPS33YLR396C RPL43AP0CX25 92 aaKnown RBP1.95□□□□□ -2.1
VPS33YLR396C RPL43BP0CX26 92 aa1.95□□□□□ -2.1
VPS33YLR396C YOR316C-AQ3E806 69 aa1.94□□□□□ -2.1
VPS33YLR396C NUM1Q00402 2748 aa1.93□□□□□ -2.1
VPS33YLR396C YDR210WQ03482 75 aa1.93□□□□□ -2.1
VPS33YLR396C YHR073W-AP0C5N7 58 aa1.92□□□□□ -2.1
VPS33YLR396C YEL014CP39999 101 aa1.92□□□□□ -2.1
VPS33YLR396C RPL37BP51402 88 aaKnown RBP1.92□□□□□ -2.1
VPS33YLR396C YHR032W-AP0C5N6 59 aa1.91□□□□□ -2.1
VPS33YLR396C OLI1P61829 76 aa1.91□□□□□ -2.1
VPS33YLR396C YBR016WP38216 128 aa1.9□□□□□ -2.11
VPS33YLR396C YCR108CQ3E819 63 aa1.9□□□□□ -2.11
VPS33YLR396C YOR394C-AQ8TGJ0 55 aa1.89□□□□□ -2.11
VPS33YLR396C YDR034C-AP0C289 58 aa1.88□□□□□ -2.11
VPS33YLR396C YBL044WP38194 122 aa1.86□□□□□ -2.11
VPS33YLR396C CMC4Q3E7A9 73 aa1.86□□□□□ -2.11
VPS33YLR396C YHR086W-AQ3E746 53 aa1.86□□□□□ -2.11
VPS33YLR396C TOR1P35169 2470 aa1.8□□□□□ -2.12
VPS33YLR396C COX7P10174 60 aa1.8□□□□□ -2.12
VPS33YLR396C LCL1Q02786 101 aa1.77□□□□□ -2.13
VPS33YLR396C RPL37AP49166 88 aaKnown RBP1.73□□□□□ -2.13
VPS33YLR396C DYN1P36022 4092 aa1.71□□□□□ -2.14
VPS33YLR396C HHY1P39982 102 aa1.7□□□□□ -2.14
VPS33YLR396C YBR072C-AQ3E794 53 aa1.7□□□□□ -2.14
VPS33YLR396C YOR072W-BQ3E832 53 aa1.68□□□□□ -2.14
VPS33YLR396C YJL009WP47078 108 aa1.65□□□□□ -2.14
VPS33YLR396C YML054C-AQ3E809 52 aa1.57□□□□□ -2.16
VPS33YLR396C Q0017Q9ZZX8 53 aa1.52□□□□□ -2.17
VPS33YLR396C CUP1-1P0CX80 61 aa1.49□□□□□ -2.17
VPS33YLR396C CUP1-2P0CX81 61 aa1.49□□□□□ -2.17
VPS33YLR396C YOL164W-AQ3E7A5 60 aa1.47□□□□□ -2.17
VPS33YLR396C MDN1Q12019 4910 aaKnown RBP1.37□□□□□ -2.19
VPS33YLR396C YHR050W-AQ05451 56 aa1.31□□□□□ -2.2
VPS33YLR396C YLR157W-EP0CF00 54 aa1.22□□□□□ -2.21
VPS33YLR396C RPS29AP41057 56 aaKnown RBP1.19□□□□□ -2.22
VPS33YLR396C RPS29BP41058 56 aaKnown RBP1.04□□□□□ -2.24
Retrieved 63 of 5,963 RNA–protein pairs in 42.6 ms