RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YML100W-AQ8TGT0 57 aa1.49□□□□□ -2.17
VPS13YLL040C PRP8P33334 2413 aaKnown RBP1.49□□□□□ -2.17
VPS13YLL040C MRX7P53869 86 aa1.49□□□□□ -2.17
VPS13YLL040C YOR381W-AQ3E804 55 aa1.49□□□□□ -2.17
VPS13YLL040C CUP1-1P0CX80 61 aa1.48□□□□□ -2.17
VPS13YLL040C CUP1-2P0CX81 61 aa1.48□□□□□ -2.17
VPS13YLL040C YLR122CQ12312 125 aa1.48□□□□□ -2.17
VPS13YLL040C YCL042WP25572 119 aa1.48□□□□□ -2.17
VPS13YLL040C QCR10P37299 77 aa1.48□□□□□ -2.17
VPS13YLL040C YBR016WP38216 128 aa1.48□□□□□ -2.17
VPS13YLL040C YFR032C-BQ8TGU2 87 aa1.48□□□□□ -2.17
VPS13YLL040C DDR48P18899 430 aaKnown RBP1.47□□□□□ -2.17
VPS13YLL040C SNA2P56508 79 aa1.47□□□□□ -2.17
VPS13YLL040C COX8P04039 78 aa1.46□□□□□ -2.18
VPS13YLL040C YDR034C-AP0C289 58 aa1.46□□□□□ -2.18
VPS13YLL040C YCR095W-AQ3E787 52 aa1.46□□□□□ -2.18
VPS13YLL040C YNL122CP53921 115 aaPredicted RBP1.45□□□□□ -2.18
VPS13YLL040C YIL102CP40488 101 aa1.44□□□□□ -2.18
VPS13YLL040C YOR268CQ08734 132 aa1.44□□□□□ -2.18
VPS13YLL040C COX7P10174 60 aa1.44□□□□□ -2.18
VPS13YLL040C YBR201C-AQ2V2Q3 67 aa1.43□□□□□ -2.18
VPS13YLL040C CSF1Q12150 2958 aa1.43□□□□□ -2.18
VPS13YLL040C RRT15Q3E811 62 aa1.43□□□□□ -2.18
VPS13YLL040C YJL009WP47078 108 aa1.42□□□□□ -2.18
VPS13YLL040C OLI1P61829 76 aa1.42□□□□□ -2.18
VPS13YLL040C YJR128WP47162 119 aa1.41□□□□□ -2.18
VPS13YLL040C Q0017Q9ZZX8 53 aa1.4□□□□□ -2.19
VPS13YLL040C YGL034CP53186 121 aa1.39□□□□□ -2.19
VPS13YLL040C YOR394C-AQ8TGJ0 55 aa1.38□□□□□ -2.19
VPS13YLL040C YGL014C-AP0C5N1 53 aa1.38□□□□□ -2.19
VPS13YLL040C YFL067WP43537 175 aa1.38□□□□□ -2.19
VPS13YLL040C YML054C-AQ3E809 52 aa1.38□□□□□ -2.19
VPS13YLL040C YIL156W-BQ2V2P4 73 aa1.37□□□□□ -2.19
VPS13YLL040C YMR230W-AQ3E7B5 62 aa1.37□□□□□ -2.19
VPS13YLL040C CMC4Q3E7A9 73 aa1.36□□□□□ -2.19
VPS13YLL040C FYV12Q08559 129 aa1.36□□□□□ -2.19
VPS13YLL040C RPL37AP49166 88 aaKnown RBP1.35□□□□□ -2.19
VPS13YLL040C YDR010CQ12426 110 aa1.35□□□□□ -2.19
VPS13YLL040C UTP20P35194 2493 aaKnown RBP1.34□□□□□ -2.2
VPS13YLL040C DYN1P36022 4092 aa1.34□□□□□ -2.2
VPS13YLL040C YPR195CQ06594 109 aa1.34□□□□□ -2.2
VPS13YLL040C YDR210WQ03482 75 aa1.33□□□□□ -2.2
VPS13YLL040C YBR072C-AQ3E794 53 aa1.32□□□□□ -2.2
VPS13YLL040C SOM1Q05676 74 aa1.32□□□□□ -2.2
VPS13YLL040C YOR072W-BQ3E832 53 aa1.31□□□□□ -2.2
VPS13YLL040C NUM1Q00402 2748 aa1.31□□□□□ -2.2
VPS13YLL040C MDN1Q12019 4910 aaKnown RBP1.3□□□□□ -2.2
VPS13YLL040C YCR108CQ3E819 63 aa1.25□□□□□ -2.21
VPS13YLL040C YOR376W-AQ3E805 51 aa1.25□□□□□ -2.21
VPS13YLL040C YBL044WP38194 122 aa1.25□□□□□ -2.21
VPS13YLL040C YEL014CP39999 101 aa1.25□□□□□ -2.21
VPS13YLL040C YJL144WP47009 104 aa1.23□□□□□ -2.21
VPS13YLL040C HHY1P39982 102 aa1.16□□□□□ -2.22
VPS13YLL040C RPS29AP41057 56 aaKnown RBP1.07□□□□□ -2.24
VPS13YLL040C YHR050W-AQ05451 56 aa1.06□□□□□ -2.24
VPS13YLL040C YHR032W-AP0C5N6 59 aa1.06□□□□□ -2.24
VPS13YLL040C RPS29BP41058 56 aaKnown RBP1.03□□□□□ -2.24
VPS13YLL040C YER175W-AQ8TGU4 54 aa1.03□□□□□ -2.24
VPS13YLL040C YER078W-AQ3E7A2 54 aa1.01□□□□□ -2.25
VPS13YLL040C YAL067W-AQ8TGK6 75 aa0.86□□□□□ -2.27
VPS13YLL040C YOL164W-AQ3E7A5 60 aa0.85□□□□□ -2.27
VPS13YLL040C YLR157W-EP0CF00 54 aa0.78□□□□□ -2.28
VPS13YLL040C YHR086W-AQ3E746 53 aa0.78□□□□□ -2.29
Retrieved 63 of 5,963 RNA–protein pairs in 9.8 ms