RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C YHL005CP38752 130 aa1.71□□□□□ -2.14
ATG27YJL178C YIR021W-AQ3E739 70 aa1.71□□□□□ -2.14
ATG27YJL178C YDR182W-AQ3E796 67 aa1.71□□□□□ -2.14
ATG27YJL178C YHR125WP38831 101 aa1.7□□□□□ -2.14
ATG27YJL178C YDR010CQ12426 110 aa1.7□□□□□ -2.14
ATG27YJL178C YLR361C-AQ3E795 98 aa1.7□□□□□ -2.14
ATG27YJL178C YJR128WP47162 119 aa1.69□□□□□ -2.14
ATG27YJL178C YHR073W-AP0C5N7 58 aa1.67□□□□□ -2.14
ATG27YJL178C YOR316C-AQ3E806 69 aa1.67□□□□□ -2.14
ATG27YJL178C KSH1Q8TGJ3 72 aa1.67□□□□□ -2.14
ATG27YJL178C KTI11Q3E840 82 aa1.66□□□□□ -2.14
ATG27YJL178C YLR255CO13574 117 aa1.64□□□□□ -2.15
ATG27YJL178C YGR164WP53291 111 aa1.63□□□□□ -2.15
ATG27YJL178C YKL065W-AQ2V2P2 73 aa1.63□□□□□ -2.15
ATG27YJL178C SDH6Q3E785 79 aa1.63□□□□□ -2.15
ATG27YJL178C YOR381W-AQ3E804 55 aa1.63□□□□□ -2.15
ATG27YJL178C YGR146C-AQ8TGT9 53 aa1.63□□□□□ -2.15
ATG27YJL178C YFR032C-BQ8TGU2 87 aa1.63□□□□□ -2.15
ATG27YJL178C YMR122CQ03879 124 aa1.62□□□□□ -2.15
ATG27YJL178C YMR001C-AQ8TGS9 76 aa1.62□□□□□ -2.15
ATG27YJL178C COX7P10174 60 aa1.61□□□□□ -2.15
ATG27YJL178C YBR016WP38216 128 aa1.61□□□□□ -2.15
ATG27YJL178C SBH1P52870 82 aa1.61□□□□□ -2.15
ATG27YJL178C YNL122CP53921 115 aaPredicted RBP1.61□□□□□ -2.15
ATG27YJL178C COX8P04039 78 aa1.6□□□□□ -2.15
ATG27YJL178C YER188C-AP0C0V2 99 aa1.59□□□□□ -2.15
ATG27YJL178C HUB1Q6Q546 73 aa1.58□□□□□ -2.16
ATG27YJL178C OST5Q92316 86 aa1.58□□□□□ -2.16
ATG27YJL178C YBR201C-AQ2V2Q3 67 aa1.57□□□□□ -2.16
ATG27YJL178C RPL37BP51402 88 aaKnown RBP1.56□□□□□ -2.16
ATG27YJL178C FYV12Q08559 129 aa1.56□□□□□ -2.16
ATG27YJL178C OLI1P61829 76 aa1.55□□□□□ -2.16
ATG27YJL178C YIL156W-BQ2V2P4 73 aa1.55□□□□□ -2.16
ATG27YJL178C YCR095W-AQ3E787 52 aa1.55□□□□□ -2.16
ATG27YJL178C MRX7P53869 86 aa1.53□□□□□ -2.16
ATG27YJL178C YLR412C-AQ3E742 68 aa1.53□□□□□ -2.16
ATG27YJL178C CMC4Q3E7A9 73 aa1.53□□□□□ -2.16
ATG27YJL178C ATP17Q06405 101 aa1.51□□□□□ -2.17
ATG27YJL178C YBL044WP38194 122 aa1.49□□□□□ -2.17
ATG27YJL178C YJL009WP47078 108 aa1.49□□□□□ -2.17
ATG27YJL178C RPS28BP0C0X0 67 aaKnown RBP1.48□□□□□ -2.17
ATG27YJL178C RPS28AQ3E7X9 67 aaPredicted RBP1.48□□□□□ -2.17
ATG27YJL178C YCR108CQ3E819 63 aa1.48□□□□□ -2.17
ATG27YJL178C YNL277W-AQ3E7Z0 62 aa1.45□□□□□ -2.18
ATG27YJL178C YOR376W-AQ3E805 51 aa1.45□□□□□ -2.18
ATG27YJL178C YOR394C-AQ8TGJ0 55 aa1.45□□□□□ -2.18
ATG27YJL178C YEL014CP39999 101 aa1.44□□□□□ -2.18
ATG27YJL178C YML100W-AQ8TGT0 57 aa1.44□□□□□ -2.18
ATG27YJL178C Q0017Q9ZZX8 53 aa1.44□□□□□ -2.18
ATG27YJL178C YDR210WQ03482 75 aa1.41□□□□□ -2.18
ATG27YJL178C YGL014C-AP0C5N1 53 aa1.39□□□□□ -2.19
ATG27YJL178C RPL37AP49166 88 aaKnown RBP1.39□□□□□ -2.19
ATG27YJL178C QCR10P37299 77 aa1.38□□□□□ -2.19
ATG27YJL178C YML054C-AQ3E809 52 aa1.37□□□□□ -2.19
ATG27YJL178C SOM1Q05676 74 aa1.33□□□□□ -2.2
ATG27YJL178C YOR072W-BQ3E832 53 aa1.3□□□□□ -2.2
ATG27YJL178C HHY1P39982 102 aa1.28□□□□□ -2.2
ATG27YJL178C YBR072C-AQ3E794 53 aa1.21□□□□□ -2.22
ATG27YJL178C RPS29BP41058 56 aaKnown RBP1.12□□□□□ -2.23
ATG27YJL178C RPS29AP41057 56 aaKnown RBP1.06□□□□□ -2.24
ATG27YJL178C YHR050W-AQ05451 56 aa1.03□□□□□ -2.24
ATG27YJL178C YOL164W-AQ3E7A5 60 aa1□□□□□ -2.25
ATG27YJL178C YLR157W-EP0CF00 54 aa0.86□□□□□ -2.27
Retrieved 63 of 5,963 RNA–protein pairs in 24.9 ms