RNA–Protein interactions for RNA: YFL028C

CAF16, Transcript of Part of evolutionarily-conserved CCR4-NOT regulatory complex, yeastyeast

Gene CAF16, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF16YFL028C YER187WP40102 141 aa2.28□□□□□ -2.04
CAF16YFL028C YLR285C-AQ3E771 56 aa2.28□□□□□ -2.04
CAF16YFL028C YSY6P38374 65 aa2.27□□□□□ -2.05
CAF16YFL028C SLO1Q3E784 85 aa2.27□□□□□ -2.05
CAF16YFL028C YLR361C-AQ3E795 98 aa2.27□□□□□ -2.05
CAF16YFL028C YFL041W-AQ3E817 63 aa2.27□□□□□ -2.05
CAF16YFL028C YPR153WQ06537 140 aa2.25□□□□□ -2.05
CAF16YFL028C YOR316C-AQ3E806 69 aa2.24□□□□□ -2.05
CAF16YFL028C YGR164WP53291 111 aa2.23□□□□□ -2.05
CAF16YFL028C YPR203WQ08994 102 aa2.23□□□□□ -2.05
CAF16YFL028C YJR128WP47162 119 aa2.2□□□□□ -2.06
CAF16YFL028C RUB1Q03919 77 aa2.2□□□□□ -2.06
CAF16YFL028C SOM1Q05676 74 aa2.2□□□□□ -2.06
CAF16YFL028C YIR021W-AQ3E739 70 aa2.2□□□□□ -2.06
CAF16YFL028C YOL013W-AP0C272 63 aaPredicted RBP2.19□□□□□ -2.06
CAF16YFL028C YIL102CP40488 101 aa2.19□□□□□ -2.06
CAF16YFL028C YOR314WQ12506 109 aa2.19□□□□□ -2.06
CAF16YFL028C YNL277W-AQ3E7Z0 62 aa2.19□□□□□ -2.06
CAF16YFL028C NOP10Q6Q547 58 aaPredicted RBP2.18□□□□□ -2.06
CAF16YFL028C YDR119W-AQ2V2P9 66 aa2.17□□□□□ -2.06
CAF16YFL028C YDR246W-AQ3E763 66 aa2.16□□□□□ -2.06
CAF16YFL028C Q0017Q9ZZX8 53 aa2.16□□□□□ -2.06
CAF16YFL028C YPL038W-AQ3E7B4 63 aa2.15□□□□□ -2.07
CAF16YFL028C YLR255CO13574 117 aa2.14□□□□□ -2.07
CAF16YFL028C YOL166W-AQ8TGJ1 51 aa2.14□□□□□ -2.07
CAF16YFL028C YGR146C-AQ8TGT9 53 aa2.14□□□□□ -2.07
CAF16YFL028C YBR016WP38216 128 aa2.13□□□□□ -2.07
CAF16YFL028C YJL009WP47078 108 aa2.13□□□□□ -2.07
CAF16YFL028C YKL065W-AQ2V2P2 73 aa2.12□□□□□ -2.07
CAF16YFL028C AIM4P38305 123 aaPredicted RBP2.11□□□□□ -2.07
CAF16YFL028C QCR10P37299 77 aa2.1□□□□□ -2.07
CAF16YFL028C YDR210WQ03482 75 aa2.09□□□□□ -2.07
CAF16YFL028C YDR182W-AQ3E796 67 aa2.09□□□□□ -2.07
CAF16YFL028C OLI1P61829 76 aa2.08□□□□□ -2.08
CAF16YFL028C RPS30AP0CX33 63 aaKnown RBP2.06□□□□□ -2.08
CAF16YFL028C RPS30BP0CX34 63 aaKnown RBP2.06□□□□□ -2.08
CAF16YFL028C YIL156W-BQ2V2P4 73 aa2.06□□□□□ -2.08
CAF16YFL028C YGL014C-AP0C5N1 53 aa2.05□□□□□ -2.08
CAF16YFL028C TOM6P33448 61 aa2.05□□□□□ -2.08
CAF16YFL028C SDH6Q3E785 79 aa2.03□□□□□ -2.08
CAF16YFL028C YMR122CQ03879 124 aa2.01□□□□□ -2.09
CAF16YFL028C YBR201C-AQ2V2Q3 67 aa2.01□□□□□ -2.09
CAF16YFL028C OST5Q92316 86 aa2.01□□□□□ -2.09
CAF16YFL028C MRX7P53869 86 aa2□□□□□ -2.09
CAF16YFL028C YBL044WP38194 122 aa1.99□□□□□ -2.09
CAF16YFL028C RPL37AP49166 88 aaKnown RBP1.99□□□□□ -2.09
CAF16YFL028C YML054C-AQ3E809 52 aa1.99□□□□□ -2.09
CAF16YFL028C YMR001C-AQ8TGS9 76 aa1.99□□□□□ -2.09
CAF16YFL028C HUB1Q6Q546 73 aa1.96□□□□□ -2.1
CAF16YFL028C YOR376W-AQ3E805 51 aa1.94□□□□□ -2.1
CAF16YFL028C YOR394C-AQ8TGJ0 55 aa1.9□□□□□ -2.11
CAF16YFL028C ATP17Q06405 101 aa1.87□□□□□ -2.11
CAF16YFL028C HHY1P39982 102 aa1.82□□□□□ -2.12
CAF16YFL028C RPS29BP41058 56 aaKnown RBP1.82□□□□□ -2.12
CAF16YFL028C YCR095W-AQ3E787 52 aa1.82□□□□□ -2.12
CAF16YFL028C YER188C-AP0C0V2 99 aa1.8□□□□□ -2.12
CAF16YFL028C YCR108CQ3E819 63 aa1.8□□□□□ -2.12
CAF16YFL028C RPS29AP41057 56 aaKnown RBP1.79□□□□□ -2.12
CAF16YFL028C YOR072W-BQ3E832 53 aa1.71□□□□□ -2.14
CAF16YFL028C YBR072C-AQ3E794 53 aa1.51□□□□□ -2.17
CAF16YFL028C YLR157W-EP0CF00 54 aa1.5□□□□□ -2.17
CAF16YFL028C YHR050W-AQ05451 56 aa1.41□□□□□ -2.18
CAF16YFL028C YOL164W-AQ3E7A5 60 aa1.23□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 96.3 ms