RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W HUG1Q6Q5K6 68 aa3.16□□□□□ -1.9
FOB1YDR110W YHR212W-AP0CX91 67 aa3.15□□□□□ -1.91
FOB1YDR110W COX7P10174 60 aa3.15□□□□□ -1.91
FOB1YDR110W YBL039W-BP0C268 59 aa3.14□□□□□ -1.91
FOB1YDR110W COX9P07255 59 aa3.13□□□□□ -1.91
FOB1YDR110W YJR128WP47162 119 aa3.13□□□□□ -1.91
FOB1YDR110W RPL39P04650 51 aa3.13□□□□□ -1.91
FOB1YDR110W YPR108W-AQ3E7B3 70 aa3.13□□□□□ -1.91
FOB1YDR110W YOL013W-AP0C272 63 aaPredicted RBP3.12□□□□□ -1.91
FOB1YDR110W YMR141CP40211 102 aa3.12□□□□□ -1.91
FOB1YDR110W YIL102CP40488 101 aa3.11□□□□□ -1.91
FOB1YDR110W YBR200W-AQ3E755 54 aa3.1□□□□□ -1.91
FOB1YDR110W GIS2P53849 153 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
FOB1YDR110W YMR105W-AQ8TGS8 64 aa3.1□□□□□ -1.91
FOB1YDR110W RPL38P49167 78 aaKnown RBP3.08□□□□□ -1.92
FOB1YDR110W DYN1P36022 4092 aa3.06□□□□□ -1.92
FOB1YDR110W YAR064WP39563 99 aa3.05□□□□□ -1.92
FOB1YDR110W RPC10P40422 70 aa3.05□□□□□ -1.92
FOB1YDR110W YOR011W-AQ3E807 68 aa3.05□□□□□ -1.92
FOB1YDR110W COA2Q3E823 68 aa3.04□□□□□ -1.92
FOB1YDR110W YPR010C-AA5Z2X5 72 aa3.03□□□□□ -1.92
FOB1YDR110W TOS6P48560 102 aa2.99□□□□□ -1.93
FOB1YDR110W YOR394C-AQ8TGJ0 55 aa2.98□□□□□ -1.93
FOB1YDR110W HHY1P39982 102 aa2.96□□□□□ -1.94
FOB1YDR110W YGR025WP53216 100 aa2.95□□□□□ -1.94
FOB1YDR110W YFR009W-AP0C5M9 85 aa2.94□□□□□ -1.94
FOB1YDR110W HOR7Q05827 59 aa2.93□□□□□ -1.94
FOB1YDR110W AUA1P32450 94 aa2.91□□□□□ -1.94
FOB1YDR110W YGL258W-AQ3E740 77 aa2.9□□□□□ -1.94
FOB1YDR110W YBR072C-AQ3E794 53 aa2.89□□□□□ -1.95
FOB1YDR110W HUA1P40325 198 aa2.87□□□□□ -1.95
FOB1YDR110W OLI1P61829 76 aa2.83□□□□□ -1.96
FOB1YDR110W YBR230W-AQ3E762 66 aa2.82□□□□□ -1.96
FOB1YDR110W TOM7P53507 60 aa2.79□□□□□ -1.96
FOB1YDR110W YHR213W-BQ8TGK1 99 aa2.79□□□□□ -1.96
FOB1YDR110W YLR342W-AQ3E810 57 aa2.76□□□□□ -1.97
FOB1YDR110W YCR108CQ3E819 63 aa2.76□□□□□ -1.97
FOB1YDR110W MDN1Q12019 4910 aaKnown RBP2.75□□□□□ -1.97
FOB1YDR110W YOR008C-AQ3E7B9 74 aa2.75□□□□□ -1.97
FOB1YDR110W YBL044WP38194 122 aa2.7□□□□□ -1.98
FOB1YDR110W YBR016WP38216 128 aa2.68□□□□□ -1.98
FOB1YDR110W YJL133C-AQ3E7A3 74 aa2.68□□□□□ -1.98
FOB1YDR110W YGR146C-AQ8TGT9 53 aa2.63□□□□□ -1.99
FOB1YDR110W YLL006W-AQ3E814 58 aa2.62□□□□□ -1.99
FOB1YDR110W YOL164W-AQ3E7A5 60 aa2.61□□□□□ -1.99
FOB1YDR110W YLL066W-BQ8TGJ7 56 aa2.61□□□□□ -1.99
FOB1YDR110W RPL37BP51402 88 aaKnown RBP2.58□□□□□ -2
FOB1YDR110W PMP3P87284 55 aa2.58□□□□□ -2
FOB1YDR110W YLR307C-AQ3E825 87 aa2.56□□□□□ -2
FOB1YDR110W YLR157W-EP0CF00 54 aa2.55□□□□□ -2
FOB1YDR110W DDR2P89113 61 aa2.53□□□□□ -2
FOB1YDR110W YDR034C-AP0C289 58 aa2.51□□□□□ -2.01
FOB1YDR110W RPL29P05747 59 aaPredicted RBP2.45□□□□□ -2.02
FOB1YDR110W YJL127C-BQ3E828 52 aa2.42□□□□□ -2.02
FOB1YDR110W RPL37AP49166 88 aaKnown RBP2.42□□□□□ -2.02
FOB1YDR110W YOR316C-AQ3E806 69 aa2.37□□□□□ -2.03
FOB1YDR110W YOR072W-BQ3E832 53 aa2.26□□□□□ -2.05
FOB1YDR110W YHR073W-AP0C5N7 58 aa2.18□□□□□ -2.06
FOB1YDR110W RPS29BP41058 56 aaKnown RBP2.05□□□□□ -2.08
FOB1YDR110W Q0017Q9ZZX8 53 aa1.96□□□□□ -2.1
FOB1YDR110W RPS29AP41057 56 aaKnown RBP1.82□□□□□ -2.12
FOB1YDR110W YML054C-AQ3E809 52 aa1.77□□□□□ -2.13
FOB1YDR110W YHR050W-AQ05451 56 aa1.64□□□□□ -2.15
Retrieved 63 of 5,963 RNA–protein pairs in 16.9 ms