RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W BSC4P53841 131 aa0.86□□□□□ -2.27
UBP1YDL122W YNL042W-BQ3E7Z2 85 aa0.86□□□□□ -2.27
UBP1YDL122W YOR034C-AQ3E735 80 aa0.86□□□□□ -2.27
UBP1YDL122W TOM6P33448 61 aa0.85□□□□□ -2.27
UBP1YDL122W YBR016WP38216 128 aa0.85□□□□□ -2.27
UBP1YDL122W RPL29P05747 59 aaPredicted RBP0.84□□□□□ -2.27
UBP1YDL122W YHR073W-AP0C5N7 58 aa0.84□□□□□ -2.28
UBP1YDL122W YLR146W-AQ2V2P1 62 aa0.84□□□□□ -2.28
UBP1YDL122W YML054C-AQ3E809 52 aa0.83□□□□□ -2.28
UBP1YDL122W YLR157W-DP0CE99 70 aa0.82□□□□□ -2.28
UBP1YDL122W YDR381C-AQ3E6R5 114 aa0.82□□□□□ -2.28
UBP1YDL122W YBR072C-AQ3E794 53 aa0.82□□□□□ -2.28
UBP1YDL122W YER188C-AP0C0V2 99 aa0.81□□□□□ -2.28
UBP1YDL122W PAU23Q07987 124 aa0.81□□□□□ -2.28
UBP1YDL122W PAU17Q12370 124 aa0.81□□□□□ -2.28
UBP1YDL122W YKL065W-AQ2V2P2 73 aa0.81□□□□□ -2.28
UBP1YDL122W PAU7P39545 55 aa0.8□□□□□ -2.28
UBP1YDL122W YOR314WQ12506 109 aa0.8□□□□□ -2.28
UBP1YDL122W YDR119W-AQ2V2P9 66 aa0.8□□□□□ -2.28
UBP1YDL122W YOR008C-AQ3E7B9 74 aa0.8□□□□□ -2.28
UBP1YDL122W YOL097W-AQ3E7Y9 61 aa0.8□□□□□ -2.28
UBP1YDL122W YBR201C-AQ2V2Q3 67 aa0.79□□□□□ -2.28
UBP1YDL122W NOP10Q6Q547 58 aaPredicted RBP0.79□□□□□ -2.28
UBP1YDL122W YLR157W-EP0CF00 54 aa0.78□□□□□ -2.28
UBP1YDL122W YIL156W-BQ2V2P4 73 aa0.78□□□□□ -2.28
UBP1YDL122W YBR230W-AQ3E762 66 aa0.77□□□□□ -2.29
UBP1YDL122W TOS6P48560 102 aa0.77□□□□□ -2.29
UBP1YDL122W PAI3P01094 68 aa0.76□□□□□ -2.29
UBP1YDL122W YJL127C-BQ3E828 52 aa0.76□□□□□ -2.29
UBP1YDL122W RPL38P49167 78 aaKnown RBP0.76□□□□□ -2.29
UBP1YDL122W ATP18P81450 59 aa0.76□□□□□ -2.29
UBP1YDL122W YLL006W-AQ3E814 58 aa0.76□□□□□ -2.29
UBP1YDL122W YNL198CP40166 100 aa0.73□□□□□ -2.29
UBP1YDL122W YDL022C-AP0C5L6 82 aa0.73□□□□□ -2.29
UBP1YDL122W ATX1P38636 73 aa0.73□□□□□ -2.29
UBP1YDL122W SDH6Q3E785 79 aa0.73□□□□□ -2.29
UBP1YDL122W YFL041W-AQ3E817 63 aa0.72□□□□□ -2.29
UBP1YDL122W YOL164W-AQ3E7A5 60 aa0.72□□□□□ -2.29
UBP1YDL122W YJR107C-AP0CT86 78 aa0.71□□□□□ -2.3
UBP1YDL122W SSS1P35179 80 aa0.69□□□□□ -2.3
UBP1YDL122W ATP17Q06405 101 aa0.69□□□□□ -2.3
UBP1YDL122W EDC1P53080 175 aaPredicted RBP0.67□□□□□ -2.3
UBP1YDL122W YDR246W-AQ3E763 66 aa0.64□□□□□ -2.31
UBP1YDL122W YJL133C-AQ3E7A3 74 aa0.64□□□□□ -2.31
UBP1YDL122W YFR009W-AP0C5M9 85 aa0.64□□□□□ -2.31
UBP1YDL122W YSY6P38374 65 aa0.64□□□□□ -2.31
UBP1YDL122W YIL102C-AQ2V2P5 75 aa0.63□□□□□ -2.31
UBP1YDL122W HUB1Q6Q546 73 aa0.63□□□□□ -2.31
UBP1YDL122W YIL134C-AQ45U18 67 aa0.62□□□□□ -2.31
UBP1YDL122W YDR182W-AQ3E796 67 aa0.62□□□□□ -2.31
UBP1YDL122W VMA9Q3E7B6 73 aa0.61□□□□□ -2.31
UBP1YDL122W YOR316C-AQ3E806 69 aa0.59□□□□□ -2.31
UBP1YDL122W RPS30AP0CX33 63 aaKnown RBP0.59□□□□□ -2.32
UBP1YDL122W RPS30BP0CX34 63 aaKnown RBP0.59□□□□□ -2.32
UBP1YDL122W OLI1P61829 76 aa0.57□□□□□ -2.32
UBP1YDL122W YOR394C-AQ8TGJ0 55 aa0.57□□□□□ -2.32
UBP1YDL122W YBL044WP38194 122 aa0.56□□□□□ -2.32
UBP1YDL122W YOL166W-AQ8TGJ1 51 aa0.55□□□□□ -2.32
UBP1YDL122W YMR001C-AQ8TGS9 76 aa0.53□□□□□ -2.33
UBP1YDL122W YCR108CQ3E819 63 aa0.49□□□□□ -2.33
UBP1YDL122W YGR146C-AQ8TGT9 53 aa0.42□□□□□ -2.34
UBP1YDL122W YOR072W-BQ3E832 53 aa0.41□□□□□ -2.34
UBP1YDL122W YHR050W-AQ05451 56 aa0.34□□□□□ -2.35
Retrieved 63 of 5,963 RNA–protein pairs in 8.2 ms