RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W COX9P07255 59 aa0.26□□□□□ -2.37
CDC39YCR093W SPI1P40092 148 aa0.25□□□□□ -2.37
CDC39YCR093W SWM2P40342 146 aa0.25□□□□□ -2.37
CDC39YCR093W PAU23Q07987 124 aa0.25□□□□□ -2.37
CDC39YCR093W PAU17Q12370 124 aa0.25□□□□□ -2.37
CDC39YCR093W ATP17Q06405 101 aa0.25□□□□□ -2.37
CDC39YCR093W YLL066W-BQ8TGJ7 56 aa0.25□□□□□ -2.37
CDC39YCR093W YMR001C-AQ8TGS9 76 aa0.24□□□□□ -2.37
CDC39YCR093W PAU7P39545 55 aa0.24□□□□□ -2.37
CDC39YCR093W YLR146W-AQ2V2P1 62 aa0.24□□□□□ -2.37
CDC39YCR093W YDR246W-AQ3E763 66 aa0.24□□□□□ -2.37
CDC39YCR093W NOP10Q6Q547 58 aaPredicted RBP0.23□□□□□ -2.37
CDC39YCR093W QCR9P22289 66 aa0.23□□□□□ -2.37
CDC39YCR093W YOR011W-AQ3E807 68 aa0.22□□□□□ -2.37
CDC39YCR093W YPR145C-AQ2V2P0 78 aa0.22□□□□□ -2.37
CDC39YCR093W YGR121W-AQ3E816 71 aa0.22□□□□□ -2.37
CDC39YCR093W RRT15Q3E811 62 aa0.22□□□□□ -2.37
CDC39YCR093W TIM12P32830 109 aa0.22□□□□□ -2.37
CDC39YCR093W YGL258W-AQ3E740 77 aa0.22□□□□□ -2.37
CDC39YCR093W YBR230W-AQ3E762 66 aa0.22□□□□□ -2.37
CDC39YCR093W YML054C-AQ3E809 52 aa0.22□□□□□ -2.37
CDC39YCR093W YDR182W-AQ3E796 67 aa0.21□□□□□ -2.38
CDC39YCR093W YKL023C-AQ2V2P3 75 aa0.21□□□□□ -2.38
CDC39YCR093W YGL194C-AQ2V2P6 80 aa0.21□□□□□ -2.38
CDC39YCR093W YLR342W-AQ3E810 57 aa0.21□□□□□ -2.38
CDC39YCR093W YOR394C-AQ8TGJ0 55 aa0.21□□□□□ -2.38
CDC39YCR093W YOL131WQ08270 108 aa0.21□□□□□ -2.38
CDC39YCR093W TOS6P48560 102 aa0.2□□□□□ -2.38
CDC39YCR093W YBL044WP38194 122 aa0.2□□□□□ -2.38
CDC39YCR093W RPL29P05747 59 aaPredicted RBP0.19□□□□□ -2.38
CDC39YCR093W PMP3P87284 55 aa0.19□□□□□ -2.38
CDC39YCR093W YCR108CQ3E819 63 aa0.19□□□□□ -2.38
CDC39YCR093W CWP2P43497 92 aa0.18□□□□□ -2.38
CDC39YCR093W YHR213W-AQ8TGT4 77 aa0.18□□□□□ -2.38
CDC39YCR093W YDR034C-AP0C289 58 aa0.18□□□□□ -2.38
CDC39YCR093W YHR073W-AP0C5N7 58 aa0.18□□□□□ -2.38
CDC39YCR093W YFL041W-AQ3E817 63 aa0.18□□□□□ -2.38
CDC39YCR093W YDR119W-AQ2V2P9 66 aa0.18□□□□□ -2.38
CDC39YCR093W RPL39P04650 51 aa0.16□□□□□ -2.38
CDC39YCR093W YBL039W-BP0C268 59 aa0.16□□□□□ -2.38
CDC39YCR093W YBR200W-AQ3E755 54 aa0.16□□□□□ -2.38
CDC39YCR093W YDL022C-AP0C5L6 82 aa0.15□□□□□ -2.38
CDC39YCR093W TOM7P53507 60 aa0.15□□□□□ -2.39
CDC39YCR093W SMX2P40204 77 aaKnown RBP0.15□□□□□ -2.39
CDC39YCR093W YSY6P38374 65 aa0.14□□□□□ -2.39
CDC39YCR093W YLR157W-DP0CE99 70 aa0.14□□□□□ -2.39
CDC39YCR093W YIL156W-BQ2V2P4 73 aa0.14□□□□□ -2.39
CDC39YCR093W YGR146C-AQ8TGT9 53 aa0.14□□□□□ -2.39
CDC39YCR093W YOR072W-BQ3E832 53 aa0.13□□□□□ -2.39
CDC39YCR093W SSS1P35179 80 aa0.13□□□□□ -2.39
CDC39YCR093W YIL102C-AQ2V2P5 75 aa0.13□□□□□ -2.39
CDC39YCR093W YOR316C-AQ3E806 69 aa0.12□□□□□ -2.39
CDC39YCR093W PAI3P01094 68 aa0.12□□□□□ -2.39
CDC39YCR093W YOR192C-CQ3E736 78 aa0.12□□□□□ -2.39
CDC39YCR093W DDR2P89113 61 aa0.11□□□□□ -2.39
CDC39YCR093W YJL127C-BQ3E828 52 aa0.09□□□□□ -2.39
CDC39YCR093W YHR050W-AQ05451 56 aa0.09□□□□□ -2.39
CDC39YCR093W YJL133C-AQ3E7A3 74 aa0.08□□□□□ -2.4
CDC39YCR093W VMA9Q3E7B6 73 aa0.08□□□□□ -2.4
CDC39YCR093W YLL006W-AQ3E814 58 aa0.06□□□□□ -2.4
CDC39YCR093W RPS30AP0CX33 63 aaKnown RBP0.05□□□□□ -2.4
CDC39YCR093W RPS30BP0CX34 63 aaKnown RBP0.05□□□□□ -2.4
CDC39YCR093W YOL166W-AQ8TGJ1 51 aa-0□□□□□ -2.41
Retrieved 63 of 5,963 RNA–protein pairs in 63.4 ms