RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W YPR153WQ06537 140 aa3.41□□□□□ -1.86
SHM1YBR263W YLR285C-AQ3E771 56 aa3.41□□□□□ -1.86
SHM1YBR263W YJL197C-AP0C5P0 93 aa3.4□□□□□ -1.87
SHM1YBR263W YHR213W-BQ8TGK1 99 aa3.38□□□□□ -1.87
SHM1YBR263W EDC1P53080 175 aaPredicted RBP3.36□□□□□ -1.87
SHM1YBR263W YJL133C-AQ3E7A3 74 aa3.35□□□□□ -1.87
SHM1YBR263W COX23P38824 151 aa3.35□□□□□ -1.87
SHM1YBR263W YOL166W-AQ8TGJ1 51 aa3.35□□□□□ -1.87
SHM1YBR263W MRX7P53869 86 aa3.34□□□□□ -1.88
SHM1YBR263W ECM19Q06011 112 aa3.34□□□□□ -1.88
SHM1YBR263W NOP10Q6Q547 58 aaPredicted RBP3.34□□□□□ -1.88
SHM1YBR263W YCR095W-AQ3E787 52 aa3.33□□□□□ -1.88
SHM1YBR263W YLR157W-DP0CE99 70 aa3.32□□□□□ -1.88
SHM1YBR263W RPS30AP0CX33 63 aaKnown RBP3.32□□□□□ -1.88
SHM1YBR263W RPS30BP0CX34 63 aaKnown RBP3.32□□□□□ -1.88
SHM1YBR263W YOL097W-AQ3E7Y9 61 aa3.32□□□□□ -1.88
SHM1YBR263W YIL156W-BQ2V2P4 73 aa3.31□□□□□ -1.88
SHM1YBR263W CMC4Q3E7A9 73 aa3.3□□□□□ -1.88
SHM1YBR263W RPL38P49167 78 aaKnown RBP3.29□□□□□ -1.88
SHM1YBR263W YHR125WP38831 101 aa3.27□□□□□ -1.89
SHM1YBR263W YER078W-AQ3E7A2 54 aa3.27□□□□□ -1.89
SHM1YBR263W HUB1Q6Q546 73 aa3.25□□□□□ -1.89
SHM1YBR263W COX7P10174 60 aa3.23□□□□□ -1.89
SHM1YBR263W YNL122CP53921 115 aaPredicted RBP3.22□□□□□ -1.89
SHM1YBR263W ATP17Q06405 101 aa3.22□□□□□ -1.89
SHM1YBR263W YAR064WP39563 99 aa3.2□□□□□ -1.9
SHM1YBR263W YHR032W-AP0C5N6 59 aa3.19□□□□□ -1.9
SHM1YBR263W YDL012CQ12489 107 aa3.19□□□□□ -1.9
SHM1YBR263W YHR073W-AP0C5N7 58 aa3.18□□□□□ -1.9
SHM1YBR263W YEL014CP39999 101 aa3.18□□□□□ -1.9
SHM1YBR263W RPL37BP51402 88 aaKnown RBP3.18□□□□□ -1.9
SHM1YBR263W YDR210WQ03482 75 aa3.14□□□□□ -1.91
SHM1YBR263W YMR001C-AQ8TGS9 76 aa3.14□□□□□ -1.91
SHM1YBR263W YGL014C-AP0C5N1 53 aa3.13□□□□□ -1.91
SHM1YBR263W SDH6Q3E785 79 aa3.12□□□□□ -1.91
SHM1YBR263W YOR316C-AQ3E806 69 aa3.11□□□□□ -1.91
SHM1YBR263W COX8P04039 78 aa3.1□□□□□ -1.91
SHM1YBR263W YIL102CP40488 101 aa3.1□□□□□ -1.91
SHM1YBR263W YOL013W-AP0C272 63 aaPredicted RBP3.08□□□□□ -1.92
SHM1YBR263W YAL067W-AQ8TGK6 75 aa3.07□□□□□ -1.92
SHM1YBR263W YJR128WP47162 119 aa3.06□□□□□ -1.92
SHM1YBR263W YJL144WP47009 104 aa3.05□□□□□ -1.92
SHM1YBR263W YBR201C-AQ2V2Q3 67 aa2.99□□□□□ -1.93
SHM1YBR263W Q0017Q9ZZX8 53 aa2.99□□□□□ -1.93
SHM1YBR263W YLR255CO13574 117 aa2.98□□□□□ -1.93
SHM1YBR263W YGR146C-AQ8TGT9 53 aa2.98□□□□□ -1.93
SHM1YBR263W YBR016WP38216 128 aa2.96□□□□□ -1.93
SHM1YBR263W YJL009WP47078 108 aa2.94□□□□□ -1.94
SHM1YBR263W OLI1P61829 76 aa2.87□□□□□ -1.95
SHM1YBR263W YOR394C-AQ8TGJ0 55 aa2.85□□□□□ -1.95
SHM1YBR263W YBL044WP38194 122 aa2.77□□□□□ -1.97
SHM1YBR263W YML054C-AQ3E809 52 aa2.77□□□□□ -1.97
SHM1YBR263W YCR108CQ3E819 63 aa2.7□□□□□ -1.98
SHM1YBR263W YBR072C-AQ3E794 53 aa2.58□□□□□ -2
SHM1YBR263W RPL37AP49166 88 aaKnown RBP2.55□□□□□ -2
SHM1YBR263W HHY1P39982 102 aa2.52□□□□□ -2.01
SHM1YBR263W RPS29BP41058 56 aaKnown RBP2.52□□□□□ -2.01
SHM1YBR263W RPS29AP41057 56 aaKnown RBP2.47□□□□□ -2.01
SHM1YBR263W YHR086W-AQ3E746 53 aa2.45□□□□□ -2.02
SHM1YBR263W YOR072W-BQ3E832 53 aa2.39□□□□□ -2.03
SHM1YBR263W YOL164W-AQ3E7A5 60 aa2.26□□□□□ -2.05
SHM1YBR263W YLR157W-EP0CF00 54 aa2.1□□□□□ -2.07
SHM1YBR263W YHR050W-AQ05451 56 aa1.96□□□□□ -2.1
Retrieved 63 of 5,963 RNA–protein pairs in 109 ms