RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 C16orf96A6NNT2 1141 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 APOC4-APOC2K7ER74 178 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 TRDMT1O14717 391 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 ASMTLO95671 621 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 APOC2P02655 101 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 RPL22P35268 128 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 XRRA1Q6P2D8 792 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 KYAT3Q6YP21 454 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 ALYREFQ86V81 257 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 EZH1Q92800 747 aaPredicted RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 UMODL1Q5DID0 1318 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 AP3B1O00203 1094 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 PEX11AO75192 247 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 H2AFYO75367 372 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 MXD4Q14582 209 aaPredicted RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 LIN52Q52LA3 116 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 DCAF12L1Q5VU92 463 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 SPIRE2Q8WWL2 714 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 NT5C1AQ9BXI3 368 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 CADM1Q9BY67 442 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 TSC22D4Q9Y3Q8 395 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 TPST1O60507 370 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 DEAF1O75398 565 aaPredicted RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 VIL1P09327 827 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 MMP14P50281 582 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 ISLR2Q6UXK2 745 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 CYP4X1Q8N118 509 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 TFB1MQ8WVM0 346 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 KREMEN1Q96MU8 473 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 NMUR2Q9GZQ4 415 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 RPAP3Q9H6T3 665 aaPredicted RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 AGO4Q9HCK5 861 aaKnown RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 SEPT3Q9UH03 358 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 ZNF229Q9UJW7 825 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 F8W8V4 182 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 MYL6P60660 151 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 RBP5P82980 135 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 GTF2BQ00403 316 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 ZBTB49Q6ZSB9 765 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 DENND5BQ6ZUT9 1274 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 KIF12Q96FN5 646 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 TMEM79Q9BSE2 394 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 GPATCH2LQ9NWQ4 482 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 NSMCE4AQ9NXX6 385 aa15.13■□□□□ 0.01
VPS36-207ENST00000611132 AJAP1Q9UKB5 411 aaPredicted RBP15.13■□□□□ 0.01
VPS36-207ENST00000611132 TMEM150BA6NC51 233 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 SPDYE5A6NIY4 337 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 C3orf70A6NLC5 250 aaPredicted RBP15.12■□□□□ 0.01
VPS36-207ENST00000611132 MAN1A2O60476 641 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 TFE3P19532 575 aaPredicted RBP15.12■□□□□ 0.01
VPS36-207ENST00000611132 ALDH1A3P47895 512 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 RPS6KA3P51812 740 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 C16orf72Q14CZ0 275 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 ZSWIM2Q8NEG5 633 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 BEST2Q8NFU1 509 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 USP13Q92995 863 aaPredicted RBP15.12■□□□□ 0.01
VPS36-207ENST00000611132 NCLNQ969V3 563 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 ZDHHC15Q96MV8 337 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 SPATA31A1Q5TZJ5 1347 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 GOLGA8CPA6NN73 597 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 CCNB1P14635 433 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 VAV1P15498 845 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 SERPINB10P48595 397 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 SOX10P56693 466 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 WDR4P57081 412 aaKnown RBP15.12■□□□□ 0.01
VPS36-207ENST00000611132 TRIM16LQ309B1 348 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 TDRD5Q8NAT2 981 aaKnown RBP15.12■□□□□ 0.01
VPS36-207ENST00000611132 PTPRN2Q92932 1015 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 BEGAINQ9BUH8 593 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 OGTO15294 1046 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 APBA3O96018 575 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 TPP2P29144 1249 aaPredicted RBP15.12■□□□□ 0.01
VPS36-207ENST00000611132 PTGER2P43116 358 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 KRT72Q14CN4 511 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 OR6P1Q8NGX9 317 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 WDR60Q8WVS4 1066 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 GPRASP2Q96D09 838 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 ZBTB18Q99592 522 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 ZCWPW1Q9H0M4 648 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 HOXC10Q9NYD6 342 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 USP20Q9Y2K6 914 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 LTN1O94822 1766 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 M0QZ92 97 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 HUS1O60921 280 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 SERPINA6P08185 405 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 ME2P23368 584 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 BBS5Q8N3I7 341 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 RMND5BQ96G75 393 aaPredicted RBP15.12■□□□□ 0.01
VPS36-207ENST00000611132 CDRT15Q96T59 188 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 NACA2Q9H009 215 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 STK32BQ9NY57 414 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 BLOC1S6Q9UL45 172 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 SNX9Q9Y5X1 595 aa15.12■□□□□ 0.01
VPS36-207ENST00000611132 SLCO1B7G3V0H7 640 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 PPP1R11O60927 126 aaPredicted RBP15.11■□□□□ 0.01
VPS36-207ENST00000611132 MYL4P12829 197 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 NAMPTP43490 491 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 MGAT5Q09328 741 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 ANO7Q6IWH7 933 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 CATSPER4Q7RTX7 472 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms