RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 EYA2O00167 538 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 STRNO43815 780 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 B4GALT4O60513 344 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 SNAI1O95863 264 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-214ENST00000572365 CD4P01730 458 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 FCER1AP12319 257 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 AKR1A1P14550 325 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 DYNLL1P63167 89 aaKnown RBP6.26□□□□□ -1.41
SF3B3-214ENST00000572365 FAM193AP78312 1265 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 EXOSC9Q06265 439 aaKnown RBP6.26□□□□□ -1.41
SF3B3-214ENST00000572365 RNF151Q2KHN1 245 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 LEXMQ3ZCV2 418 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 TCERG1LQ5VWI1 586 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 C11orf96Q7Z7L8 435 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 DAAM2Q86T65 1068 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 FAM124AQ86V42 546 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 ZGPATQ8N5A5 531 aaKnown RBP6.26□□□□□ -1.41
SF3B3-214ENST00000572365 CCHCR1Q8TD31 782 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 CASKIN2Q8WXE0 1202 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 CFHR4Q92496 578 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 RABGGTAQ92696 567 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 GPHA2Q96T91 129 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 FTOQ9C0B1 505 aaKnown RBP eCLIP6.26□□□□□ -1.41
SF3B3-214ENST00000572365 ENKD1Q9H0I2 346 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 USP25Q9UHP3 1055 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 NR2E1Q9Y466 385 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 A0A1W2PRG0 241 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 TMEM221A6NGB7 291 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 CAPN8A6NHC0 703 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 LRRC14BA6NHZ5 514 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 M0R296 226 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 MPHOSPH10O00566 681 aaKnown RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 PAX4O43316 350 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 NOBOXO60393 691 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 GPR32O75388 356 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 ARIH2O95376 493 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 RFX5P48382 616 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 NKX6-1P78426 367 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 TLE1Q04724 770 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 MTM1Q13496 603 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 SEMA5AQ13591 1074 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 COG2Q14746 738 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 VMACQ2NL98 169 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 ZNF568Q3ZCX4 644 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 CCDC149Q6ZUS6 474 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 ZNF572Q7Z3I7 529 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 ADGRA1Q86SQ6 560 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 RSPH3Q86UC2 560 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 HERC6Q8IVU3 1022 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 CMTM4Q8IZR5 234 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 SAMD3Q8N6K7 520 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 PMM1Q92871 262 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 RAB24Q969Q5 203 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 NSUN4Q96CB9 384 aaKnown RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 TMX3Q96JJ7 454 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 FAM167AQ96KS9 214 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 NEUROD6Q96NK8 337 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 KCNH6Q9H252 994 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 ALG13Q9NP73 1137 aaKnown RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 TRMT13Q9NUP7 481 aaKnown RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 FBXO28Q9NVF7 368 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 HERC5Q9UII4 1024 aaKnown RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 AJAP1Q9UKB5 411 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-214ENST00000572365 ATRXP46100 2492 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 SALL1Q9NSC2 1324 aa6.25□□□□□ -1.41
SF3B3-214ENST00000572365 ACACBO00763 2458 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 ZNF292O60281 2723 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 MATN2O00339 956 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 CTAGE5O15320 804 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 SLC26A4O43511 780 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 NUAK1O60285 661 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 B4GALT3O60512 393 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 FLOT1O75955 427 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 PDGFBP01127 241 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-214ENST00000572365 ARP10275 920 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 DDCP20711 480 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 RAB1AP62820 205 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 BIRC2Q13490 618 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 ITGA7Q13683 1181 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 ACAP1Q15027 740 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 PKN1Q16512 942 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 KIAA0753Q2KHM9 967 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 CERKLQ49MI3 558 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-214ENST00000572365 KHDC1Q4VXA5 237 aaKnown RBP6.24□□□□□ -1.41
SF3B3-214ENST00000572365 PRAMEF14Q5SWL7 426 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 SPTY2D1Q68D10 685 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-214ENST00000572365 IL31Q6EBC2 164 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 SWSAP1Q6NVH7 229 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 DARS2Q6PI48 645 aaKnown RBP6.24□□□□□ -1.41
SF3B3-214ENST00000572365 PDZD4Q76G19 769 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-214ENST00000572365 ADGRE4PQ86SQ3 457 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 FOXP4Q8IVH2 680 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-214ENST00000572365 SHCBP1Q8NEM2 672 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 REPS2Q8NFH8 660 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 RPL10LQ96L21 214 aaKnown RBP6.24□□□□□ -1.41
SF3B3-214ENST00000572365 RPS6KC1Q96S38 1066 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 C17orf80Q9BSJ5 609 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 BHMT2Q9H2M3 363 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 LDAHQ9H6V9 325 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms