RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CACNB2Q08289 660 aaPredicted RBP18.92■□□□□ 0.62
SMPD3-211ENST00000568373 STAT4Q14765 748 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 FAM71DQ8N9W8 422 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 CPT1BQ92523 772 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 CCT8L2Q96SF2 557 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 CCDC77Q9BR77 488 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 DUSP16Q9BY84 665 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 GMNCA6NCL1 334 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 EBAG9O00559 213 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 GPR182O15218 404 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 FAM107AO95990 144 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 THP07101 528 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 STIP1P31948 543 aaKnown RBP18.91■□□□□ 0.62
SMPD3-211ENST00000568373 SLC8A3P57103 927 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 CA9Q16790 459 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 ANKRD20A8PQ5CZ79 823 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 CENPUQ71F23 418 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 PIGZQ86VD9 579 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 EXOC3L1Q86VI1 746 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 PLD5Q8N7P1 536 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 ZNF670Q9BS34 389 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 ZNF487B1APH4 448 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 ALOX15BO15296 676 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 ASGR1P07306 291 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 CHN1P15882 459 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 PTPN1P18031 435 aaKnown RBP18.91■□□□□ 0.62
SMPD3-211ENST00000568373 IGFBP6P24592 240 aaPredicted RBP18.91■□□□□ 0.62
SMPD3-211ENST00000568373 ACAT1P24752 427 aaKnown RBP18.91■□□□□ 0.62
SMPD3-211ENST00000568373 AFF1P51825 1210 aaKnown RBP18.91■□□□□ 0.62
SMPD3-211ENST00000568373 FASTKD3Q14CZ7 662 aaKnown RBP18.91■□□□□ 0.62
SMPD3-211ENST00000568373 CCDC38Q502W7 563 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 ERMARDQ5T6L9 678 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 DARS2Q6PI48 645 aaKnown RBP18.91■□□□□ 0.62
SMPD3-211ENST00000568373 PQLC3Q8N755 202 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 NAT8LQ8N9F0 302 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 LPPQ93052 612 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 FAF2Q96CS3 445 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 ADAM33Q9BZ11 813 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 PHACTR1Q9C0D0 580 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 AGO3Q9H9G7 860 aaKnown RBP18.91■□□□□ 0.62
SMPD3-211ENST00000568373 CACNG4Q9UBN1 327 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 CTNNAL1Q9UBT7 734 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 CASP8AP2Q9UKL3 1982 aa18.91■□□□□ 0.62
SMPD3-211ENST00000568373 A0A087WUV0 522 aaPredicted RBP18.9■□□□□ 0.62
SMPD3-211ENST00000568373 APOL1O14791 398 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 CDH16O75309 829 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 ALDH1A1P00352 501 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 NPR3P17342 541 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 TGM2P21980 687 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 HIF1AQ16665 826 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 EFHC1Q5JVL4 640 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 SLC9A4Q6AI14 798 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 ZC3H18Q86VM9 953 aaKnown RBP18.9■□□□□ 0.62
SMPD3-211ENST00000568373 PCDH19Q8TAB3 1148 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 ZNF473Q8WTR7 871 aaKnown RBP18.9■□□□□ 0.62
SMPD3-211ENST00000568373 ARHGEF2Q92974 986 aaKnown RBP18.9■□□□□ 0.62
SMPD3-211ENST00000568373 SENP8Q96LD8 212 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 XPO6Q96QU8 1125 aaKnown RBP18.9■□□□□ 0.62
SMPD3-211ENST00000568373 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMPD3-211ENST00000568373 LGALS13Q9UHV8 139 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 GIT1Q9Y2X7 761 aa18.9■□□□□ 0.62
SMPD3-211ENST00000568373 ARL5CA6NH57 179 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 CLDN5O00501 218 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 ADIGQ0VDE8 80 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 KCNA10Q16322 511 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 DPYSL2Q16555 572 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 ANKRD22Q5VYY1 191 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 C1orf228Q6PIY5 440 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 PAQR9Q6ZVX9 377 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 ZBED8Q8IZ13 594 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 HHIPL1Q96JK4 782 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 MIOSQ9NXC5 875 aa18.89■□□□□ 0.62
SMPD3-211ENST00000568373 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.89■□□□□ 0.62
SMPD3-211ENST00000568373 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.89■□□□□ 0.62
SMPD3-211ENST00000568373 GOLGA8MH3BSY2 632 aa18.89■□□□□ 0.61
SMPD3-211ENST00000568373 SMAPO00193 183 aa18.89■□□□□ 0.61
SMPD3-211ENST00000568373 CCND3P30281 292 aaPredicted RBP18.89■□□□□ 0.61
SMPD3-211ENST00000568373 THPOP40225 353 aa18.89■□□□□ 0.61
SMPD3-211ENST00000568373 APLP1P51693 650 aa18.89■□□□□ 0.61
SMPD3-211ENST00000568373 CLCNKBP51801 687 aa18.89■□□□□ 0.61
SMPD3-211ENST00000568373 ATXN1P54253 815 aaKnown RBP18.89■□□□□ 0.61
SMPD3-211ENST00000568373 BCAR1P56945 870 aa18.89■□□□□ 0.61
SMPD3-211ENST00000568373 PDIA2Q13087 525 aaKnown RBP18.89■□□□□ 0.61
SMPD3-211ENST00000568373 PPP6R3Q5H9R7 873 aaPredicted RBP18.89■□□□□ 0.61
SMPD3-211ENST00000568373 AGMOQ6ZNB7 445 aa18.89■□□□□ 0.61
SMPD3-211ENST00000568373 MRPL10Q7Z7H8 261 aaKnown RBP18.89■□□□□ 0.61
SMPD3-211ENST00000568373 KLHDC9Q8NEP7 349 aa18.89■□□□□ 0.61
SMPD3-211ENST00000568373 DDX43Q9NXZ2 648 aaKnown RBP18.89■□□□□ 0.61
SMPD3-211ENST00000568373 H7C0C1 242 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 AOC2O75106 756 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 MYCNP04198 464 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-211ENST00000568373 MATKP42679 507 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 ATP5OP48047 213 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 ADCY1Q08828 1119 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 MDH1BQ5I0G3 518 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 KIAA0319Q5VV43 1072 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 STRADAQ7RTN6 431 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 TMEM86AQ8N2M4 240 aa18.88■□□□□ 0.61
SMPD3-211ENST00000568373 RIBC1Q8N443 379 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-211ENST00000568373 ATXN2LQ8WWM7 1075 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms