RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 RNF43Q68DV7 783 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 GPRIN1Q7Z2K8 1008 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 C12orf29Q8N999 325 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 IL17RCQ8NAC3 791 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 PDZD8Q8NEN9 1154 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 GOLGA5Q8TBA6 731 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 TWNKQ96RR1 684 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 ARHGEF4Q9NR80 690 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 RCOR1Q9UKL0 485 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
PDCD2-207ENST00000539212 SH3BP1Q9Y3L3 701 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 EPG5Q9HCE0 2579 aa18.28■□□□□ 0.52
PDCD2-207ENST00000539212 CACNA1BQ00975 2339 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 CHD8Q9HCK8 2581 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 E2F8A0AVK6 867 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 TRIM24O15164 1050 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 APODP05090 189 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 ZDHHC11BP0C7U3 371 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 ADORA2BP29275 332 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 KIR2DL1P43626 348 aaPredicted RBP18.27■□□□□ 0.52
PDCD2-207ENST00000539212 MAP3K7CLP57077 242 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 MRPS21P82921 87 aaKnown RBP18.27■□□□□ 0.52
PDCD2-207ENST00000539212 ZACNQ401N2 412 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 SV2AQ7L0J3 742 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 DDX42Q86XP3 938 aaKnown RBP eCLIP18.27■□□□□ 0.52
PDCD2-207ENST00000539212 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 TNIP3Q96KP6 325 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 IL37Q9NZH6 218 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 CFAP45Q9UL16 551 aa18.27■□□□□ 0.52
PDCD2-207ENST00000539212 FRYQ5TBA9 3013 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 LNP1A1A4G5 178 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 ADAM23O75077 832 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 TBX18O95935 607 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 TRIM49P0CI25 452 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 TRIM49CP0CI26 452 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 PIK3CAP42336 1068 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 AP3M2P53677 418 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 USP39Q53GS9 565 aaKnown RBP18.26■□□□□ 0.51
PDCD2-207ENST00000539212 ARMCX6Q7L4S7 300 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 SLC9A9Q8IVB4 645 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 ETFBKMTQ8IXQ9 262 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 KIAA1958Q8N8K9 716 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 CCDC26Q8TAB7 109 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 DDX1Q92499 740 aaKnown RBP18.26■□□□□ 0.51
PDCD2-207ENST00000539212 ERLEC1Q96DZ1 483 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 OSER1Q9NX31 292 aa18.26■□□□□ 0.51
PDCD2-207ENST00000539212 FAM92AA1XBS5 289 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 PDXKO00764 312 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 CYP26A1O43174 497 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 ASS1P00966 412 aaKnown RBP18.25■□□□□ 0.51
PDCD2-207ENST00000539212 HLA-DRAP01903 254 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 RPN1P04843 607 aaKnown RBP18.25■□□□□ 0.51
PDCD2-207ENST00000539212 EIF2DP41214 584 aaKnown RBP18.25■□□□□ 0.51
PDCD2-207ENST00000539212 DHPSP49366 369 aaPredicted RBP18.25■□□□□ 0.51
PDCD2-207ENST00000539212 GAD2Q05329 585 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 SGSM1Q2NKQ1 1148 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 SNX30Q5VWJ9 437 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 ATL3Q6DD88 541 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 TMEM25Q86YD3 366 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 OLIG1Q8TAK6 271 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 HMGB4Q8WW32 186 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 LSM14BQ9BX40 385 aaKnown RBP18.25■□□□□ 0.51
PDCD2-207ENST00000539212 NACA2Q9H009 215 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 APOBEC3GQ9HC16 384 aaKnown RBP18.25■□□□□ 0.51
PDCD2-207ENST00000539212 TBC1D14Q9P2M4 693 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 MBD1Q9UIS9 605 aaPredicted RBP18.25■□□□□ 0.51
PDCD2-207ENST00000539212 HCN2Q9UL51 889 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 MAPK8IP1Q9UQF2 711 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 HPSEQ9Y251 543 aa18.25■□□□□ 0.51
PDCD2-207ENST00000539212 ATXN2Q99700 1313 aaKnown RBP18.24■□□□□ 0.51
PDCD2-207ENST00000539212 TCRBV21S2A2A0A5A6 115 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 C4orf47A7E2U8 309 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 GIPC1O14908 333 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 MDM4O15151 490 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 GREM1O60565 184 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 TLR5O60602 858 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 TULP3O75386 442 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 KCNK5O95279 499 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
PDCD2-207ENST00000539212 PMLP29590 882 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 GRIA2P42262 883 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 WASP42768 502 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 TUBP50607 506 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 ANO4Q32M45 955 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 PSAPL1Q6NUJ1 521 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 CLEC20AQ6ZU45 233 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 CYP2U1Q7Z449 544 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 TAS1R2Q8TE23 839 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 MMRN2Q9H8L6 949 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 NMUR1Q9HB89 426 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 CSNK1G1Q9HCP0 422 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 SPHK2Q9NRA0 654 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 BCCIPQ9P287 314 aaKnown RBP eCLIP18.24■□□□□ 0.51
PDCD2-207ENST00000539212 NUDT5Q9UKK9 219 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 ZDHHC9Q9Y397 364 aa18.24■□□□□ 0.51
PDCD2-207ENST00000539212 WDFY3Q8IZQ1 3526 aa18.23■□□□□ 0.51
PDCD2-207ENST00000539212 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.23■□□□□ 0.51
PDCD2-207ENST00000539212 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.23■□□□□ 0.51
PDCD2-207ENST00000539212 HHLA1C9JL84 531 aa18.23■□□□□ 0.51
PDCD2-207ENST00000539212 HOXC11O43248 304 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms