RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 PPCSQ9HAB8 311 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 KCNK9Q9NPC2 374 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 CYLDQ9NQC7 956 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 TBK1Q9UHD2 729 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 SLC12A4Q9UP95 1085 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 NAALADL1Q9UQQ1 740 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 H7C0C1 242 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 TNPO2O14787 897 aaKnown RBP14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 APOL1O14791 398 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 SPTLC1O15269 473 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 HCRTO43612 131 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 HUS1O60921 280 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 TGM2P21980 687 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 HOXC8P31273 242 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 PTPN9P43378 593 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 ACADSBP45954 432 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 ATP5OP48047 213 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 PURAQ00577 322 aaKnown RBP14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 ANKRD22Q5VYY1 191 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 TWF2Q6IBS0 349 aaKnown RBP14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 TAF2Q6P1X5 1199 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 CYB5D1Q6P9G0 228 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 TRPM8Q7Z2W7 1104 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 ADGRF2Q8IZF7 708 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 CYP4X1Q8N118 509 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 NAT8LQ8N9F0 302 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 MGARPQ8TDB4 240 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 PCDH18Q9HCL0 1135 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 GPATCH2LQ9NWQ4 482 aa14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 USP15Q9Y4E8 981 aaPredicted RBP14.35□□□□□ -0.11
LDLRAD3-202ENST00000524419 M0QZ92 97 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 CHUKO15111 745 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 MDM4O15151 490 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 CAPN15O75808 1086 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 AKR1A1P14550 325 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 BRAFP15056 766 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 STIP1P31948 543 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 SOX4Q06945 474 aaPredicted RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 HP1BP3Q5SSJ5 553 aaPredicted RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 C1orf228Q6PIY5 440 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 SLC26A9Q7LBE3 791 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 ZC3H18Q86VM9 953 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 TDRPQ86YL5 185 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 IFNL1Q8IU54 200 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 ANKRD42Q8N9B4 389 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 SMG8Q8ND04 991 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 TNIP3Q96KP6 325 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 PLCD4Q9BRC7 762 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 SNRNP25Q9BV90 132 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 B3GNT5Q9BYG0 378 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 GOLGA2P5Q9HBQ8 144 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 HAUS2Q9NVX0 235 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 EURLQ9NYK6 297 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 TCP11X1B4DZS4 312 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 KPNA6O60684 536 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 GABBR2O75899 941 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 LCP1P13796 627 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 CREB1P16220 341 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 LMO2P25791 158 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 PHBP35232 272 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 BASP1P80723 227 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 LRRC14Q15048 493 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 ZC3H12AQ5D1E8 599 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 PPP1R21Q6ZMI0 780 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 CAPN12Q6ZSI9 719 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 ARHGEF18Q6ZSZ5 1173 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 LIMS2Q7Z4I7 341 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 ANKMY2Q8IV38 441 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 PARP9Q8IXQ6 854 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 SRRM1Q8IYB3 904 aaKnown RBP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 ATP11CQ8NB49 1132 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 SLC2A14Q8TDB8 520 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 ZNF670Q9BS34 389 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 ZFYVE28Q9HCC9 887 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 NKIRAS1Q9NYS0 192 aa14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.34□□□□□ -0.11
LDLRAD3-202ENST00000524419 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 CFAP69A5D8W1 941 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 ZNF487B1APH4 448 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 ATP2C2O75185 946 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 SUN1O94901 812 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 RPL34P49207 117 aaKnown RBP14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 HDAC4P56524 1084 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 BCAR1P56945 870 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 MRPS6P82932 125 aaKnown RBP14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 RNASELQ05823 741 aaKnown RBP14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 ZNF618Q5T7W0 954 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 ARCQ7LC44 396 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 FAM228AQ86W67 206 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 TAB3Q8N5C8 712 aaPredicted RBP14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 PLD5Q8N7P1 536 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 ARRDC4Q8NCT1 418 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 MAGEC3Q8TD91 643 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 CLEC4CQ8WTT0 213 aa14.33□□□□□ -0.12
LDLRAD3-202ENST00000524419 PYROXD1Q8WU10 500 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms