RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ALDH1A2O94788 518 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 KAT7O95251 611 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 PRR29P0C7W0 189 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 GTF2H1P32780 548 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 SEC13P55735 322 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 MAP3K7CLP57077 242 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 MCCD1P59942 119 aaPredicted RBP21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 ADAM9Q13443 819 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 CRY1Q16526 586 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 PLA2G2CQ5R387 149 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 BTBD8Q5XKL5 378 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 SPOPLQ6IQ16 392 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 NUDT18Q6ZVK8 323 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 RASSF3Q86WH2 238 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 ELMO3Q96BJ8 720 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 CNOT6LQ96LI5 555 aaKnown RBP21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 DUSP15Q9H1R2 295 aaPredicted RBP21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 CCSER2Q9H7U1 834 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 ARHGEF4Q9NR80 690 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 VPS45Q9NRW7 570 aa21.11■□□□□ 0.97
UBE2D3-220ENST00000505307 TLR5O60602 858 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 ZNF202O95125 648 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 MPLP40238 635 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 GCLMP48507 274 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 GOLGA8FQ08AF8 430 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 GOLGA8DPQ0D2H9 430 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 EDRF1Q3B7T1 1238 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 LY6G5CQ5SRR4 150 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 IL31Q6EBC2 164 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 TTC39CQ8N584 583 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 C12orf29Q8N999 325 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 KCNV2Q8TDN2 545 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 CYFIP2Q96F07 1278 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 NIF3L1Q9GZT8 377 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 TMEM8AQ9HCN3 771 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 FAM49BQ9NUQ9 324 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 HMGXB4Q9UGU5 601 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 SCML2Q9UQR0 700 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 PCDHA5Q9Y5H7 936 aa21.1■□□□□ 0.97
UBE2D3-220ENST00000505307 SPTBN2O15020 2390 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 SCAMP3O14828 347 aaKnown RBP21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 HOXC11O43248 304 aaPredicted RBP21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 GDF9O60383 454 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 BEST1O76090 585 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 SLC6A11P48066 632 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 PPP3CAQ08209 521 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 ORC1Q13415 861 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 EOGTQ5NDL2 527 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 CCDC33Q8N5R6 958 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 TAS1R2Q8TE23 839 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 FAM124BQ9H5Z6 455 aaPredicted RBP21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 CYLDQ9NQC7 956 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 SPHK2Q9NRA0 654 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 MAPK8IP1Q9UQF2 711 aa21.09■□□□□ 0.97
UBE2D3-220ENST00000505307 KIAA1549LQ6ZVL6 1849 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 STX10O60499 249 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 CILPO75339 1184 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 TRIM49P0CI25 452 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 TRIM49CP0CI26 452 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 ADORA2BP29275 332 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 ATP5C1P36542 298 aaKnown RBP21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 SF3A2Q15428 464 aaKnown RBP21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 ZCWPW2Q504Y3 356 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 KRT39Q6A163 491 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 ANO7Q6IWH7 933 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 KLHDC10Q6PID8 442 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 CLEC20AQ6ZU45 233 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 HTR3DQ70Z44 454 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 C12orf40Q86WS4 652 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 IL17RCQ8NAC3 791 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 CHAMP1Q96JM3 812 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 APOBEC3GQ9HC16 384 aaKnown RBP21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 POLMQ9NP87 494 aaPredicted RBP21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 DEC1Q9P2X7 70 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 MYO16Q9Y6X6 1858 aa21.08■□□□□ 0.97
UBE2D3-220ENST00000505307 EML5Q05BV3 1969 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 KLF8O95600 359 aaPredicted RBP21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 GBP1P32455 592 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 KIR2DL1P43626 348 aaPredicted RBP21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 PSEN1P49768 467 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 PPM1JQ5JR12 505 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 TRMT11Q7Z4G4 463 aaKnown RBP21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 TADA2BQ86TJ2 420 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 BBS7Q8IWZ6 715 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 ETFBKMTQ8IXQ9 262 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 ALLCQ8N6M5 410 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 TXNDC5Q8NBS9 432 aaKnown RBP21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 TWNKQ96RR1 684 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 GOLPH3LQ9H4A5 285 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 RMND1Q9NWS8 449 aa21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 LSM7Q9UK45 103 aaKnown RBP21.07■□□□□ 0.96
UBE2D3-220ENST00000505307 BCLAF3A2AJT9 711 aaKnown RBP21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 TBC1D3BA6NDS4 549 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 HHLA1C9JL84 531 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 DCLK1O15075 740 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 CETN3O15182 167 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 ADRB1P08588 477 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 ACO1P21399 889 aaKnown RBP21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 TIE1P35590 1138 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 BYSLQ13895 437 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms