RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	DENND2C	Q68D51	928 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	PTCHD4	Q6ZW05	846 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	SAMD3	Q8N6K7	520 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	C16orf52	Q8NHV5	167 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	ZC3H10	Q96K80	434 aa	Known RBP	4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	AIFM3	Q96NN9	605 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	KRTAP1-5	Q9BYS1	174 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	SNX15	Q9NRS6	342 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	MTMR4	Q9NYA4	1195 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650		A0A0U1RQG5	324 aa	Predicted RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	E2F8	A0AVK6	867 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	SRGAP2	O75044	1071 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	LDHA	P00338	332 aa	Known RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	KRT18	P05783	430 aa	Known RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	TMEM191B	P0C7N4	346 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	SCP2	P22307	547 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	HOXD9	P28356	352 aa	Predicted RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	EPHA3	P29320	983 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	ZNF91	Q05481	1191 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	HLTF	Q14527	1009 aa	Known RBP eCLIP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	DHX8	Q14562	1220 aa	Known RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	TTF1	Q15361	905 aa	Predicted RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	RBMS2	Q15434	407 aa	Known RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	INSC	Q1MX18	579 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	ANO6	Q4KMQ2	910 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	ZDHHC24	Q6UX98	284 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	IRF2BP2	Q7Z5L9	587 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	COL23A1	Q86Y22	540 aa	Predicted RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	C16orf71	Q8IYS4	520 aa	Predicted RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	ZBTB34	Q8NCN2	500 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	ZBTB45	Q96K62	511 aa	Predicted RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	HS6ST2	Q96MM7	605 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	PPP1R9B	Q96SB3	815 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	DPH1	Q9BZG8	443 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	ZNF518B	Q9C0D4	1074 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	EBF3	Q9H4W6	596 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	SMURF2	Q9HAU4	748 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	A1CF	Q9NQ94	594 aa	Known RBP	4	□□□□□ -1.77
VPS36-205	ENST00000492650	MGAT4C	Q9UBM8	478 aa		4	□□□□□ -1.77
VPS36-205	ENST00000492650	TTC3	P53804	2025 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650		H3BNC9	293 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	AKAP10	O43572	662 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	RASSF9	O75901	435 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	PRF1	P14222	555 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	EN2	P19622	333 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	UQCRC1	P31930	480 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	DIO1	P49895	249 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	RAB27A	P51159	221 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	ITGA8	P53708	1063 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	MCL1	Q07820	350 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	PPP2R5A	Q15172	486 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	C10orf25	Q5T742	122 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	B3GNT9	Q6UX72	402 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	NPNT	Q6UXI9	565 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	RANBP10	Q6VN20	620 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	KCTD20	Q7Z5Y7	419 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	IL31RA	Q8NI17	732 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	NSMCE1	Q8WV22	266 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	MAP4K1	Q92918	833 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	SPSB4	Q96A44	273 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	COQ8B	Q96D53	544 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	TAAR9	Q96RI9	348 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	MPHOSPH6	Q99547	160 aa	Known RBP	3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	SENP7	Q9BQF6	1050 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	B3GNT5	Q9BYG0	378 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	FOXP1	Q9H334	677 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	ARNT2	Q9HBZ2	717 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	XPNPEP3	Q9NQH7	507 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	SACM1L	Q9NTJ5	587 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	CDY1	Q9Y6F8	540 aa		3.99	□□□□□ -1.77
VPS36-205	ENST00000492650	IFRD1	O00458	451 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	CTNND1	O60716	968 aa	Known RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	MYL1	P05976	194 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	CYP19A1	P11511	503 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	APEH	P13798	732 aa	Known RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	AGFG1	P52594	562 aa	Known RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	SUMO3	P55854	103 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	BRD3	Q15059	726 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	ZRSR2	Q15696	482 aa	Known RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	TRIM71	Q2Q1W2	868 aa	Known RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	CC2D1B	Q5T0F9	858 aa	Known RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	TMEM63B	Q5T3F8	832 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	SYCP2L	Q5T4T6	812 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	RUSC1-AS1	Q66K80	236 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	DCDC5	Q6ZRR9	648 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	MAEA	Q7L5Y9	396 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	LIX1L	Q8IVB5	337 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	SAMD14	Q8IZD0	417 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	OR56A3	Q8NH54	315 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	MAFA	Q8NHW3	353 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	ZNF398	Q8TD17	642 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	SUCLG2	Q96I99	432 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	SIGLEC11	Q96RL6	698 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	VN1R3	Q9BXE9	311 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	TRIM5	Q9C035	493 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	ZNF700	Q9H0M5	742 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	ATP6V0A4	Q9HBG4	840 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	TMEM184C	Q9NVA4	438 aa		3.98	□□□□□ -1.77
VPS36-205	ENST00000492650	PAXBP1	Q9Y5B6	917 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms