RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PSD4Q8NDX1 1056 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 KCNG4Q8TDN1 519 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 TFAP2CQ92754 450 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 KTI12Q96EK9 354 aaPredicted RBP5.9□□□□□ -1.46
COPA-203ENST00000481040 BORCS6Q96GS4 357 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 TRIB1Q96RU8 372 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 SPATA25Q9BR10 227 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 FUZQ9BT04 418 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 TMEM168Q9H0V1 697 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 ZCCHC17Q9NP64 241 aaKnown RBP5.9□□□□□ -1.46
COPA-203ENST00000481040 ADD3Q9UEY8 706 aaKnown RBP5.9□□□□□ -1.46
COPA-203ENST00000481040 GIMAP2Q9UG22 337 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 USP22Q9UPT9 525 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 CDYLQ9Y232 598 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 RAD54BQ9Y620 910 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 PMF1-BGLAPU3KQ54 211 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 AP3D1O14617 1153 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 PEX10O60683 326 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 PRSS23O95084 383 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 LARGE1O95461 756 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 MLYCDO95822 493 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 HSPA1AP0DMV8 641 aaKnown RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 HSPA1BP0DMV9 641 aaKnown RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 HGFP14210 728 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 GLULP15104 373 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 CFPP27918 469 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 PAFAH1B1P43034 410 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 GCLCP48506 637 aaPredicted RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 PXNP49023 591 aaPredicted RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 EPHB3P54753 998 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 ADAM17P78536 824 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 FHL3Q13643 280 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 NFYCQ13952 458 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 SEC23BQ15437 767 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 TBCEQ15813 527 aaPredicted RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 NRN1LQ496H8 165 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 TAPT1Q6NXT6 567 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 TAF2Q6P1X5 1199 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 RNF169Q8NCN4 708 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 MBD3L2Q8NHZ7 208 aaPredicted RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 HIST1H2AAQ96QV6 131 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 TCF25Q9BQ70 676 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 SLF1Q9BQI6 1058 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 MECRQ9BV79 373 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 ARHGAP39Q9C0H5 1083 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 USP44Q9H0E7 712 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 ZCWPW1Q9H0M4 648 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 RMI1Q9H9A7 625 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 EIF2B3Q9NR50 452 aaKnown RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 LIN7CQ9NUP9 197 aaKnown RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 PLA2G3Q9NZ20 509 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 TBC1D14Q9P2M4 693 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 ADAM29Q9UKF5 820 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 CAMK2AQ9UQM7 478 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 NAALADL1Q9UQQ1 740 aa5.89□□□□□ -1.47
COPA-203ENST00000481040 MRPS17Q9Y2R5 130 aaKnown RBP5.89□□□□□ -1.47
COPA-203ENST00000481040 MYOCOSA0A1B0GUC4 107 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 FAM170AA1A519 330 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 PABPN1LA6NDY0 278 aaKnown RBP5.88□□□□□ -1.47
COPA-203ENST00000481040 TSPY2A6NKD2 308 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 GTPBP1O00178 669 aaKnown RBP5.88□□□□□ -1.47
COPA-203ENST00000481040 DKC1O60832 514 aaKnown RBP eCLIP5.88□□□□□ -1.47
COPA-203ENST00000481040 CYP1A1P04798 512 aaPredicted RBP5.88□□□□□ -1.47
COPA-203ENST00000481040 TSPY3P0CV98 308 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 TSPY8P0CW00 308 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 FCER1AP12319 257 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 PORP16435 677 aaPredicted RBP5.88□□□□□ -1.47
COPA-203ENST00000481040 HK1P19367 917 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 NTSR1P30989 418 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 GGT5P36269 586 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 ARL3P36405 182 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 MLH1P40692 756 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 PGDP52209 483 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 TSPY1Q01534 308 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 MAMLD1Q13495 774 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 WTAPQ15007 396 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 PKN1Q16512 942 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 CSRP2Q16527 193 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 FAM69AQ5T7M9 428 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 TMEM132EQ6IEE7 984 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 EFCAB12Q6NXP0 572 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 ATF7IPQ6VMQ6 1270 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 LCNL1Q6ZST4 164 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 DOK3Q7L591 496 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 GPRIN1Q7Z2K8 1008 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 PXKQ7Z7A4 578 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 RPAP2Q8IXW5 612 aaPredicted RBP5.88□□□□□ -1.47
COPA-203ENST00000481040 NSUN7Q8NE18 718 aaKnown RBP5.88□□□□□ -1.47
COPA-203ENST00000481040 SLC22A17Q8WUG5 538 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 CUL5Q93034 780 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 MCRS1Q96EZ8 462 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 SLC38A3Q99624 504 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 ITPAQ9BY32 194 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 CXorf36Q9H7Y0 433 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 PLEKHA2Q9HB19 425 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 IL21RQ9HBE5 538 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 GBA2Q9HCG7 927 aaPredicted RBP5.88□□□□□ -1.47
COPA-203ENST00000481040 TMLHEQ9NVH6 421 aa5.88□□□□□ -1.47
COPA-203ENST00000481040 FAM53CQ9NYF3 392 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms