RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 MYH11P35749 1972 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ASB14A6NK59 587 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 AGPSO00116 658 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 NDUFAB1O14561 156 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 CXCL11O14625 94 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ASAP2O43150 1006 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 TTI1O43156 1089 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 DAPK3O43293 454 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 MED7O43513 233 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 PSTPIP1O43586 416 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ADCY3O60266 1144 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 SHOX2O60902 331 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 TOM1L1O75674 476 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 FARP2O94887 1054 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 LSM8O95777 96 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 CALB1P05937 261 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 C8AP07357 584 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 MMEP08473 750 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM191BP0C7N4 346 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 P4HA1P13674 534 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 UBA1P22314 1058 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ADSSP30520 456 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 POLR2BP30876 1174 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ARL2P36404 184 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 HSD17B3P37058 310 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 SSR1P43307 286 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 PMS2P54278 862 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 CCNA1P78396 465 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 MRPS25P82663 173 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 FMO1Q01740 532 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 TNFAIP2Q03169 654 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ADCY2Q08462 1091 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 PRKG1Q13976 671 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 VGLL4Q14135 290 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 MPP2Q14168 576 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 KRT71Q3SY84 523 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ZACNQ401N2 412 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 C1orf220Q5T0J3 134 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 NAA35Q5VZE5 725 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 LBX2Q6XYB7 198 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ARMC9Q7Z3E5 817 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ZSWIM9Q86XI8 627 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ERO1BQ86YB8 467 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 SLC13A5Q86YT5 568 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 JAMLQ86YT9 394 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 WDR49Q8IV35 697 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 CCDC50Q8IVM0 306 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 RHOT1Q8IXI2 618 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 IQCKQ8N0W5 287 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 C3orf20Q8ND61 904 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 PPP1R13LQ8WUF5 828 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 SEMA4DQ92854 862 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 UBE2FQ969M7 185 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ANKRD36BP1Q96IX9 119 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 KREMEN1Q96MU8 473 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 MMP19Q99542 508 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 CCDC77Q9BR77 488 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 PAGR1Q9BTK6 254 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 TRIM31Q9BZY9 425 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 MIS12Q9H081 205 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 SPATC1LQ9H0A9 340 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 SMARCAD1Q9H4L7 1026 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 XPNPEP1Q9NQW7 623 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 PDLIM7Q9NR12 457 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 TAS2R14Q9NYV8 317 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 BCCIPQ9P287 314 aaKnown RBP eCLIP6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 PCYOX1Q9UHG3 505 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 IP6K2Q9UHH9 426 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 RSPH14Q9UHP6 348 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 ANAPC7Q9UJX3 599 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 PCDHA3Q9Y5H8 950 aa6.22□□□□□ -1.41
ATPAF1-204ENST00000474020 IGKV6D-21A0A0A0MT36 114 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 A0A0B4J269 797 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 OGTO15294 1046 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ZEB2O60315 1214 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PPFIA2O75334 1257 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 MAFO75444 373 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 STBD1O95210 358 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 IL18RAPO95256 599 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 KRT14P02533 472 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PRKCBP05771 671 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 CLTAP09496 248 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM153BP0C7A2 387 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 HARSP12081 509 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ITGA4P13612 1032 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ATF2P15336 505 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 CHRNB2P17787 502 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 GLRA2P23416 452 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TCF7P36402 384 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 COILP38432 576 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PLTPP55058 493 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 NOP14P78316 857 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PTP4A2Q12974 167 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 SGSM1Q2NKQ1 1148 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM153CQ494X1 144 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 SNAP47Q5SQN1 464 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms