RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 FAXDC2Q96IV6 333 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 HHIPQ96QV1 700 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 GTPBP4Q9BZE4 634 aaKnown RBP9.53□□□□□ -0.88
USF1-204ENST00000472217 FBXO44Q9H4M3 255 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 PNPLA8Q9NP80 782 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 PARD6AQ9NPB6 346 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 TLR8Q9NR97 1041 aaKnown RBP9.53□□□□□ -0.88
USF1-204ENST00000472217 CISHQ9NSE2 258 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 OSER1Q9NX31 292 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 TBC1D14Q9P2M4 693 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 SCML2Q9UQR0 700 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 CCDC163A0A0D9SF12 145 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 ANTXRLA6NF34 631 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 K7EQS6 105 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 PSMA7O14818 248 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 GADD45BO75293 160 aaPredicted RBP9.52□□□□□ -0.89
USF1-204ENST00000472217 TBX18O95935 607 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 ADH1CP00326 375 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 RETP07949 1114 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 IRF1P10914 325 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 ADH5P11766 374 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
USF1-204ENST00000472217 EIF2DP41214 584 aaKnown RBP9.52□□□□□ -0.89
USF1-204ENST00000472217 SLC6A11P48066 632 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 RAD23BP54727 409 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 SEC13P55735 322 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 DMC1Q14565 340 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 LY6G5CQ5SRR4 150 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 C12orf40Q86WS4 652 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 SFTPA1Q8IWL2 248 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 BBS7Q8IWZ6 715 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 ELOA2Q8IYF1 753 aaPredicted RBP9.52□□□□□ -0.89
USF1-204ENST00000472217 CAMKK1Q8N5S9 505 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 FAM160A2Q8N612 972 aaPredicted RBP9.52□□□□□ -0.89
USF1-204ENST00000472217 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.89
USF1-204ENST00000472217 USP33Q8TEY7 942 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 OTUB2Q96DC9 234 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 HEXIM2Q96MH2 286 aaKnown RBP9.52□□□□□ -0.89
USF1-204ENST00000472217 DUSP16Q9BY84 665 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 NACA2Q9H009 215 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 CYLDQ9NQC7 956 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 ARMCX3Q9UH62 379 aaPredicted RBP9.52□□□□□ -0.89
USF1-204ENST00000472217 MAN1B1Q9UKM7 699 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 USP18Q9UMW8 372 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 COQ4Q9Y3A0 265 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 SH3BP1Q9Y3L3 701 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 MYH10P35580 1976 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 EML5Q05BV3 1969 aa9.52□□□□□ -0.89
USF1-204ENST00000472217 GPR179Q6PRD1 2367 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 CFAP54Q96N23 3096 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 A0A1W2PQH9 124 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 GREM1O60565 184 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 RPP40O75818 363 aaKnown RBP9.51□□□□□ -0.89
USF1-204ENST00000472217 CCDC192P0DO97 292 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 BMP6P22004 513 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 ATP5C1P36542 298 aaKnown RBP9.51□□□□□ -0.89
USF1-204ENST00000472217 KIF11P52732 1056 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 KDSRQ06136 332 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 STIM1Q13586 685 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 CUL2Q13617 745 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 C2orf27AQ580R0 203 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 HTR3DQ70Z44 454 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 ERMP1Q7Z2K6 904 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 CCDC186Q7Z3E2 898 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 SCD5Q86SK9 330 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 TTC39CQ8N584 583 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 GAB3Q8WWW8 586 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 TMEM176AQ96HP8 235 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 DHTKD1Q96HY7 919 aaPredicted RBP9.51□□□□□ -0.89
USF1-204ENST00000472217 PNKPQ96T60 521 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 DUSP9Q99956 384 aaKnown RBP9.51□□□□□ -0.89
USF1-204ENST00000472217 KLF16Q9BXK1 252 aaPredicted RBP9.51□□□□□ -0.89
USF1-204ENST00000472217 FAM124BQ9H5Z6 455 aaPredicted RBP9.51□□□□□ -0.89
USF1-204ENST00000472217 NMUR1Q9HB89 426 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.51□□□□□ -0.89
USF1-204ENST00000472217 NUDT5Q9UKK9 219 aa9.51□□□□□ -0.89
USF1-204ENST00000472217 PTPRZ1P23471 2315 aaPredicted RBP9.51□□□□□ -0.89
USF1-204ENST00000472217 EP300Q09472 2414 aaPredicted RBP9.51□□□□□ -0.89
USF1-204ENST00000472217 PPP1R3GB7ZBB8 358 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 BIN1O00499 593 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 MDM4O15151 490 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 AXIN1O15169 862 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 HOXC11O43248 304 aaPredicted RBP9.5□□□□□ -0.89
USF1-204ENST00000472217 LRP3O75074 770 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 KAT7O95251 611 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 APBB3O95704 486 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 APODP05090 189 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 CHRM1P11229 460 aaPredicted RBP9.5□□□□□ -0.89
USF1-204ENST00000472217 RARGP13631 454 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 PPP1R2P41236 205 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 GRIA2P42262 883 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 FMO5P49326 533 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 LMNB2Q03252 620 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 GAD2Q05329 585 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 LRMPQ12912 555 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 MORC3Q14149 939 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 PUM1Q14671 1186 aaKnown RBP eCLIP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms