RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 TTC30AQ86WT1 665 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 CACTIN-AS1Q8N1I8 211 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 MYCT1Q8N699 235 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 NECAB1Q8N987 351 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 C1orf127Q8N9H9 656 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 CXorf38Q8TB03 319 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 NXPE2Q96DL1 559 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 CALML4Q96GE6 196 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 LRIG1Q96JA1 1093 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 PNMA5Q96PV4 448 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 ELOVL4Q9GZR5 314 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.25□□□□□ -1.255e-11■■■■■ 186.3
SF3A3-205ENST00000470585 SPHK2Q9NRA0 654 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 MARK1Q9P0L2 795 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 USP36Q9P275 1121 aaKnown RBP7.25□□□□□ -1.25
SF3A3-205ENST00000470585 WDR35Q9P2L0 1181 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 GTF3C4Q9UKN8 822 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 R3HCC1Q9Y3T6 440 aaKnown RBP7.25□□□□□ -1.25
SF3A3-205ENST00000470585 CPQQ9Y646 472 aa7.25□□□□□ -1.25
SF3A3-205ENST00000470585 ATXN2Q99700 1313 aaKnown RBP7.25□□□□□ -1.25
SF3A3-205ENST00000470585 TENM4Q6N022 2769 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 FAM92AA1XBS5 289 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 TULP3O75386 442 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 TACC1O75410 805 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 PPP1R37O75864 691 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 C1SP09871 688 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 HLA-EP13747 358 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 NDUFV2P19404 249 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 WARSP23381 471 aaKnown RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 POLR2BP30876 1174 aaKnown RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 GRK6P43250 576 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 TOB1P50616 345 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 RAD51AP2Q09MP3 1159 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 ORC1Q13415 861 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 ENPP2Q13822 863 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 SOWAHAQ2M3V2 549 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 C10orf76Q5T2E6 689 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 SDHAF4Q5VUM1 108 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 CRELD2Q6UXH1 353 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 SLCO6A1Q86UG4 719 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 GPBP1Q86WP2 473 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 C12orf40Q86WS4 652 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 SCN4BQ8IWT1 228 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 RGL4Q8IZJ4 473 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 FAM184AQ8NB25 1140 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 MYCBPAPQ8TBZ2 947 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 MDM1Q8TC05 714 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 IPO4Q8TEX9 1081 aaKnown RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 HNRNPLLQ8WVV9 542 aaKnown RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 POMGNT1Q8WZA1 660 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 MRGPRX1Q96LB2 322 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 ZSCAN31Q96LW9 406 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 XPO6Q96QU8 1125 aaKnown RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 SYT15Q9BQS2 421 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 STRA6Q9BX79 667 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 RNF38Q9H0F5 515 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 PRORYQ9H606 182 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 FBRSQ9HAH7 460 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 TM7SF3Q9NS93 570 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 TOR4AQ9NXH8 423 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 WSB2Q9NYS7 404 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 IL37Q9NZH6 218 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 CFAP97Q9P2B7 532 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 LIMCH1Q9UPQ0 1083 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 AGAP1Q9UPQ3 857 aa7.24□□□□□ -1.25
SF3A3-205ENST00000470585 COL5A1P20908 1838 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-205ENST00000470585 TRABD2BA6NFA1 517 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 PP2D1A8MPX8 630 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 METTL12A8MUP2 240 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 MEI4A8MW99 385 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 BCAT2O15382 392 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-205ENST00000470585 RRP8O43159 456 aaKnown RBP7.23□□□□□ -1.25
SF3A3-205ENST00000470585 CILPO75339 1184 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 ITGB3P05106 788 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 MBL2P11226 248 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-205ENST00000470585 PLA2G2AP14555 144 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 GAP43P17677 238 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 YWHAQP27348 245 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 ADSSP30520 456 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 HNF1BP35680 557 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 GRIK1P39086 918 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 UBA7P41226 1012 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 SLC6A11P48066 632 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 AFF3P51826 1226 aaKnown RBP7.23□□□□□ -1.25
SF3A3-205ENST00000470585 TFAMQ00059 246 aaKnown RBP7.23□□□□□ -1.25
SF3A3-205ENST00000470585 GOLGA8FQ08AF8 430 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 GOLGA8DPQ0D2H9 430 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 STARD3Q14849 445 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 IL17AQ16552 155 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 PTPRNQ16849 979 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 HECTD3Q5T447 861 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 EMC10Q5UCC4 262 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 GRAMD4Q6IC98 578 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 KLHDC10Q6PID8 442 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 LRRC69Q6ZNQ3 347 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 HTR3DQ70Z44 454 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 ZNF720Q7Z2F6 126 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 CHPFQ8IZ52 775 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 TMEM130Q8N3G9 435 aa7.23□□□□□ -1.25
SF3A3-205ENST00000470585 CSGALNACT2Q8N6G5 542 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms