RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 EML5Q05BV3 1969 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 E2F8A0AVK6 867 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 TLR5O60602 858 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 ACO1P21399 889 aaKnown RBP19.97■□□□□ 0.79
COL5A1-203ENST00000460264 HOXC13P31276 330 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 OPRD1P41143 372 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 CUL2Q13617 745 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 FBXO43Q4G163 708 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 HEATR6Q6AI08 1181 aaKnown RBP19.97■□□□□ 0.79
COL5A1-203ENST00000460264 ADGRG2Q8IZP9 1017 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 HEXIM2Q96MH2 286 aaKnown RBP19.97■□□□□ 0.79
COL5A1-203ENST00000460264 DUSP16Q9BY84 665 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 CYLDQ9NQC7 956 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 TBC1D14Q9P2M4 693 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 CTNND2Q9UQB3 1225 aa19.97■□□□□ 0.79
COL5A1-203ENST00000460264 ATG13O75143 517 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 FMO5P49326 533 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 KIF11P52732 1056 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 DHCR24Q15392 516 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 CCDC40Q4G0X9 1142 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 ARHGAP17Q68EM7 881 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 LONP2Q86WA8 852 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 DCLK2Q8N568 766 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 NACA2Q9H009 215 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 NMUR1Q9HB89 426 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 OSER1Q9NX31 292 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 CHMP5Q9NZZ3 219 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 NCDNQ9UBB6 729 aa19.96■□□□□ 0.79
COL5A1-203ENST00000460264 BICDL2A1A5D9 508 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 TBX18O95935 607 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 ADH1CP00326 375 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 UBE2HP62256 183 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 RHBDF2Q6PJF5 856 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 CCDC186Q7Z3E2 898 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 WBP2Q969T9 261 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 OTUB2Q96DC9 234 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 SH3BP1Q9Y3L3 701 aa19.95■□□□□ 0.78
COL5A1-203ENST00000460264 SPAG17Q6Q759 2223 aa19.94■□□□□ 0.78
COL5A1-203ENST00000460264 A0A1W2PQH9 124 aa19.94■□□□□ 0.78
COL5A1-203ENST00000460264 PMM2O15305 246 aa19.94■□□□□ 0.78
COL5A1-203ENST00000460264 IRF1P10914 325 aa19.94■□□□□ 0.78
COL5A1-203ENST00000460264 YWHAEP62258 255 aaKnown RBP19.94■□□□□ 0.78
COL5A1-203ENST00000460264 PAK1Q13153 545 aa19.94■□□□□ 0.78
COL5A1-203ENST00000460264 KIAA2013Q8IYS2 634 aa19.94■□□□□ 0.78
COL5A1-203ENST00000460264 RPLP0P6Q8NHW5 317 aa19.94■□□□□ 0.78
COL5A1-203ENST00000460264 USP3Q9Y6I4 520 aa19.94■□□□□ 0.78
COL5A1-203ENST00000460264 HRO43593 1189 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 ADH5P11766 374 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 TBXAS1P24557 533 aaPredicted RBP19.93■□□□□ 0.78
COL5A1-203ENST00000460264 ATP5C1P36542 298 aaKnown RBP19.93■□□□□ 0.78
COL5A1-203ENST00000460264 EIF2DP41214 584 aaKnown RBP19.93■□□□□ 0.78
COL5A1-203ENST00000460264 LRMPQ12912 555 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 SRSF5Q13243 272 aaKnown RBP19.93■□□□□ 0.78
COL5A1-203ENST00000460264 LY6G5CQ5SRR4 150 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 SCD5Q86SK9 330 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 WDR5BQ86VZ2 330 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 C12orf40Q86WS4 652 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 BBS7Q8IWZ6 715 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 UBR7Q8N806 425 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 KLF16Q9BXK1 252 aaPredicted RBP19.93■□□□□ 0.78
COL5A1-203ENST00000460264 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL5A1-203ENST00000460264 POLR3BQ9NW08 1133 aaPredicted RBP19.93■□□□□ 0.78
COL5A1-203ENST00000460264 RAB23Q9ULC3 237 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 SLC8A2Q9UPR5 921 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 CEP250Q9BV73 2442 aa19.93■□□□□ 0.78
COL5A1-203ENST00000460264 K7EQS6 105 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 GREM1O60565 184 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 RARGP13631 454 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 CNR2P34972 360 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 PSEN1P49768 467 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 STX17P56962 302 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 MESP2Q0VG99 397 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 LPAL2Q16609 132 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 GOLGA7BQ2TAP0 167 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 KLHDC10Q6PID8 442 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 PRR23BQ6ZRT6 265 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 SYT13Q7L8C5 426 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 TTC30AQ86WT1 665 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 TRIM59Q8IWR1 403 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 TRIML1Q8N9V2 468 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 ANKRD52Q8NB46 1076 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 SECISBP2LQ93073 1101 aaKnown RBP19.92■□□□□ 0.78
COL5A1-203ENST00000460264 ACDQ96AP0 544 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 UBXN6Q9BZV1 441 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 KIAA1468Q9P260 1216 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 NAGPAQ9UK23 515 aa19.92■□□□□ 0.78
COL5A1-203ENST00000460264 CCDC163A0A0D9SF12 145 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 MDM4O15151 490 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 P4HA2O15460 535 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 SLC6A11P48066 632 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 PXNP49023 591 aaPredicted RBP19.91■□□□□ 0.78
COL5A1-203ENST00000460264 MARSP56192 900 aaKnown RBP19.91■□□□□ 0.78
COL5A1-203ENST00000460264 SIM2Q14190 667 aaPredicted RBP19.91■□□□□ 0.78
COL5A1-203ENST00000460264 CAMK4Q16566 473 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 SGO2Q562F6 1265 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 RAB41Q5JT25 222 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 C10orf120Q5SQS8 335 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 LAIR1Q6GTX8 287 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 HTR3DQ70Z44 454 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 PIGZQ86VD9 579 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms