RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 KCNN4O15554 427 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 RIPK2O43353 540 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 OPHN1O60890 802 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 ODC1P11926 461 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 ETS1P14921 441 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 TNFRSF8P28908 595 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 PNPLA4P41247 253 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 OTUD4Q01804 1114 aaKnown RBP11.01□□□□□ -0.65
TOP3B-210ENST00000444502 STAT4Q14765 748 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 PPP1R15BQ5SWA1 713 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 C6orf163Q5TEZ5 329 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 PHACTR1Q9C0D0 580 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 NUDT5Q9UKK9 219 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 DNPEPQ9ULA0 475 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 A0A0G2JND7 137 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 PSTPIP1O43586 416 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 ASGR1P07306 291 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 APRTP07741 180 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 MCF2P10911 925 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 SMPD1P17405 629 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 ARF4P18085 180 aaPredicted RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 SKOR1P84550 965 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 SP2Q02086 613 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 CENPCQ03188 943 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 TAP1Q03518 808 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 RCN2Q14257 317 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 C10orf120Q5SQS8 335 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 RNF219Q5W0B1 726 aaPredicted RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 RASGEF1CQ8N431 466 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 FIZ1Q96SL8 496 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 KLC2Q9H0B6 622 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 RSAD1Q9HA92 442 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 CTNNAL1Q9UBT7 734 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 NFASCO94856 1347 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 M0QYT0 321 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 MAPK13O15264 365 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 PIAS1O75925 651 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 SYDE1Q6ZW31 735 aaPredicted RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 YTHDF3Q7Z739 585 aaKnown RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 EDEM1Q92611 657 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 C12orf42Q96LP6 360 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 STAU2Q9NUL3 570 aaKnown RBP eCLIP11□□□□□ -0.65
TOP3B-210ENST00000444502 WDR35Q9P2L0 1181 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 TRPV2Q9Y5S1 764 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 SCAMP3O14828 347 aaKnown RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 CCND1P24385 295 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 SESN2P58004 480 aaPredicted RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 KCNJ2P63252 427 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 MAMLD1Q13495 774 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 STILQ15468 1287 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 FAM171A1Q5VUB5 890 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 CCDC62Q6P9F0 684 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 SPOCD1Q6ZMY3 1216 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 C3orf62Q6ZUJ4 267 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 FAM228AQ86W67 206 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 DCP1BQ8IZD4 617 aaKnown RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 TTC25Q96NG3 672 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 SLC13A1Q9BZW2 595 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 NXF3Q9H4D5 531 aaKnown RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 GOLGA2P5Q9HBQ8 144 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 ETNK1Q9HBU6 452 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 UBN1Q9NPG3 1134 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 KRT82Q9NSB4 513 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 ARHGAP28Q9P2N2 729 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 FAM8A1Q9UBU6 413 aa11□□□□□ -0.65
TOP3B-210ENST00000444502 TNRC6CQ9HCJ0 1690 aaKnown RBP11□□□□□ -0.65
TOP3B-210ENST00000444502 NT5C1B-RDH14C9J2C7 533 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 SUPT3HO75486 399 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 SMNDC1O75940 238 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■■□ 24.8
TOP3B-210ENST00000444502 ALDH2P05091 517 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 RECQLP46063 649 aaPredicted RBP10.99□□□□□ -0.65
TOP3B-210ENST00000444502 COG7P83436 770 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 C1QBPQ07021 282 aaKnown RBP10.99□□□□□ -0.65
TOP3B-210ENST00000444502 CCNG2Q16589 344 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.99□□□□□ -0.65
TOP3B-210ENST00000444502 RNF220Q5VTB9 566 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 OVOS1Q6IE37 1185 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 TTC27Q6P3X3 843 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 SLFN11Q7Z7L1 901 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 MREGQ8N565 214 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 ATP11CQ8NB49 1132 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 EXD1Q8NHP7 514 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 ADAM32Q8TC27 787 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 PPP4R1Q8TF05 950 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 BORCS6Q96GS4 357 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 TMEM176AQ96HP8 235 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 SLITRK1Q96PX8 696 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 SP110Q9HB58 689 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 TSR3Q9UJK0 312 aaKnown RBP10.99□□□□□ -0.65
TOP3B-210ENST00000444502 NOCTQ9UK39 431 aaKnown RBP10.99□□□□□ -0.65
TOP3B-210ENST00000444502 ST3GAL5Q9UNP4 418 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 R3HDM2Q9Y2K5 976 aaKnown RBP10.99□□□□□ -0.65
TOP3B-210ENST00000444502 A8MUI8 341 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 ATP9BO43861 1147 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 ARIH2O95376 493 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 MMP3P08254 477 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 MAP7Q14244 749 aa10.99□□□□□ -0.65
TOP3B-210ENST00000444502 SPRED3Q2MJR0 410 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms