RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MDGA1Q8NFP4 955 aa21.96■■□□□ 1.11
CPNE1-219ENST00000440240 SLC2A14Q8TDB8 520 aa21.96■■□□□ 1.11
CPNE1-219ENST00000440240 CCDC47Q96A33 483 aaKnown RBP21.96■■□□□ 1.11
CPNE1-219ENST00000440240 ELMO3Q96BJ8 720 aa21.96■■□□□ 1.11
CPNE1-219ENST00000440240 CCSER2Q9H7U1 834 aa21.96■■□□□ 1.11
CPNE1-219ENST00000440240 POLMQ9NP87 494 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-219ENST00000440240 GMIPQ9P107 970 aa21.96■■□□□ 1.11
CPNE1-219ENST00000440240 TRAF3IP3Q9Y228 551 aa21.96■■□□□ 1.11
CPNE1-219ENST00000440240 EML5Q05BV3 1969 aa21.96■■□□□ 1.11
CPNE1-219ENST00000440240 MAPK13O15264 365 aa21.95■■□□□ 1.1
CPNE1-219ENST00000440240 KLF8O95600 359 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-219ENST00000440240 ASS1P00966 412 aaKnown RBP21.95■■□□□ 1.1
CPNE1-219ENST00000440240 TIE1P35590 1138 aa21.95■■□□□ 1.1
CPNE1-219ENST00000440240 KIR2DL1P43626 348 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-219ENST00000440240 TMEM92Q6UXU6 159 aa21.95■■□□□ 1.1
CPNE1-219ENST00000440240 TTC30AQ86WT1 665 aa21.95■■□□□ 1.1
CPNE1-219ENST00000440240 SPRYD3Q8NCJ5 442 aa21.95■■□□□ 1.1
CPNE1-219ENST00000440240 KCNV2Q8TDN2 545 aa21.95■■□□□ 1.1
CPNE1-219ENST00000440240 SMOQ99835 787 aa21.95■■□□□ 1.1
CPNE1-219ENST00000440240 LSM14BQ9BX40 385 aaKnown RBP21.95■■□□□ 1.1
CPNE1-219ENST00000440240 TLR8Q9NR97 1041 aaKnown RBP21.95■■□□□ 1.1
CPNE1-219ENST00000440240 DEC1Q9P2X7 70 aa21.95■■□□□ 1.1
CPNE1-219ENST00000440240 TBC1D3BA6NDS4 549 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 ANTXRLA6NF34 631 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 HOXC11O43248 304 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-219ENST00000440240 CCDC130P13994 396 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 VAMP7P51809 220 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 MAP3K7CLP57077 242 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 MESP2Q0VG99 397 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 EMC10Q5UCC4 262 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 C12orf40Q86WS4 652 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 ZMIZ2Q8NF64 920 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 OLIG1Q8TAK6 271 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 SPATA32Q96LK8 384 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 IMPG2Q9BZV3 1241 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 DNAI2Q9GZS0 605 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 SPHK2Q9NRA0 654 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 HPSEQ9Y251 543 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 ABCA7Q8IZY2 2146 aa21.94■■□□□ 1.1
CPNE1-219ENST00000440240 SGK1O00141 431 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 KHNYNO15037 678 aaKnown RBP21.93■■□□□ 1.1
CPNE1-219ENST00000440240 TLR5O60602 858 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 BEST1O76090 585 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 HLA-DRAP01903 254 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 PIK3CAP42336 1068 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 SYKP43405 635 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 ASPAP45381 313 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 BYSLQ13895 437 aaKnown RBP21.93■■□□□ 1.1
CPNE1-219ENST00000440240 TCEAL6Q6IPX3 200 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 HTR3DQ70Z44 454 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 INTS8Q75QN2 995 aaKnown RBP21.93■■□□□ 1.1
CPNE1-219ENST00000440240 SFTPA1Q8IWL2 248 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 BBS7Q8IWZ6 715 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 C12orf29Q8N999 325 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 WHAMMQ8TF30 809 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 TCEAL3Q969E4 200 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 HNRNPABQ99729 332 aaKnown RBP21.93■■□□□ 1.1
CPNE1-219ENST00000440240 EDEM2Q9BV94 578 aa21.93■■□□□ 1.1
CPNE1-219ENST00000440240 MYO16Q9Y6X6 1858 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 TULP3O75386 442 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 RHOBTB3O94955 611 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 FAM200BP0CF97 657 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 ATP5C1P36542 298 aaKnown RBP21.92■■□□□ 1.1
CPNE1-219ENST00000440240 KRT85P78386 507 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 KDSRQ06136 332 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 ORC1Q13415 861 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 NFIL3Q16649 462 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 ANO4Q32M45 955 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 C1orf220Q5T0J3 134 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 N4BP2L1Q5TBK1 243 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-219ENST00000440240 SPOPLQ6IQ16 392 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 CYP2U1Q7Z449 544 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 TRMT11Q7Z4G4 463 aaKnown RBP21.92■■□□□ 1.1
CPNE1-219ENST00000440240 TMEM25Q86YD3 366 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 ETFBKMTQ8IXQ9 262 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 PHTF2Q8N3S3 785 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 NAT16Q8N8M0 369 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 CYFIP2Q96F07 1278 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 SPACA7Q96KW9 195 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 NT5C1AQ9BXI3 368 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 CYP3A43Q9HB55 503 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 FAM49BQ9NUQ9 324 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 BCCIPQ9P287 314 aaKnown RBP eCLIP21.92■■□□□ 1.15e-7■■■□□ 17.8
CPNE1-219ENST00000440240 HMGXB4Q9UGU5 601 aa21.92■■□□□ 1.1
CPNE1-219ENST00000440240 LAMA1P25391 3075 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 MAP3K13O43283 966 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 CHRM1P11229 460 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-219ENST00000440240 HNRNPLP14866 589 aaKnown RBP eCLIP21.91■■□□□ 1.1
CPNE1-219ENST00000440240 NR2F2P24468 414 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 RPL13P26373 211 aaKnown RBP21.91■■□□□ 1.1
CPNE1-219ENST00000440240 P2RY2P41231 377 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 ENPEPQ07075 957 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 GOLGA8FQ08AF8 430 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 GOLGA8DPQ0D2H9 430 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 INCA1Q0VD86 236 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 DAB2IPQ5VWQ8 1189 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 LPCAT2Q7L5N7 544 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 CHAMP1Q96JM3 812 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 PNPLA8Q9NP80 782 aa21.91■■□□□ 1.1
CPNE1-219ENST00000440240 CYLDQ9NQC7 956 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms