RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 DDX42Q86XP3 938 aaKnown RBP eCLIP12.43□□□□□ -0.42
HSPG2-206ENST00000439717 SIX6OS1Q8N1H7 587 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 SHDQ96IW2 340 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 LHX5Q9H2C1 402 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 TSPY26PQ9H489 355 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 ACP6Q9NPH0 428 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 CNGB3Q9NQW8 809 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 ARHGEF3Q9NR81 526 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.43□□□□□ -0.42
HSPG2-206ENST00000439717 MYH10P35580 1976 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 ANAPC1Q9H1A4 1944 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 TRIOO75962 3097 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 A0A1W2PQC6 194 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 A0A1W2PQH9 124 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 FAM86C2PA6NEL3 165 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 LEFTY2O00292 366 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 ARNTLO00327 626 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 FBXO21O94952 628 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 PNMA6AP0CW24 399 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-206ENST00000439717 MBL2P11226 248 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-206ENST00000439717 RARGP13631 454 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 GLULP15104 373 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 KRT9P35527 623 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 ATP5C1P36542 298 aaKnown RBP12.42□□□□□ -0.42
HSPG2-206ENST00000439717 ACADSBP45954 432 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 PGFP49763 221 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 JAM2P57087 298 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 ADIGQ0VDE8 80 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 MTF1Q14872 753 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 PDGFRLQ15198 375 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 CC2D1AQ6P1N0 951 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-206ENST00000439717 SCD5Q86SK9 330 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 SLC47A2Q86VL8 602 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 SIX5Q8N196 739 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 SH3RF2Q8TEC5 729 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 IRGQQ8WZA9 623 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 PBXIP1Q96AQ6 731 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 MSANTD3Q96H12 275 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 SPAG5Q96R06 1193 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 ULBP1Q9BZM6 244 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 NACA2Q9H009 215 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 CCSER2Q9H7U1 834 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 NMUR1Q9HB89 426 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 OSER1Q9NX31 292 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 NAGPAQ9UK23 515 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 CPQQ9Y646 472 aa12.42□□□□□ -0.42
HSPG2-206ENST00000439717 KRBA1A5PL33 1030 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 EPHB6O15197 1021 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 TEX33O43247 280 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 LCP1P13796 627 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 CYP11B1P15538 503 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 SOX5P35711 763 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 STAT1P42224 750 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 RGS7P49802 495 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 STARD6P59095 220 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 DAOAP59103 153 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 ZNF445P59923 1031 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 YWHAGP61981 247 aaKnown RBP eCLIP12.41□□□□□ -0.42
HSPG2-206ENST00000439717 FANCCQ00597 558 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 NR1I3Q14994 352 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 MLF2Q15773 248 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-206ENST00000439717 C1orf228Q6PIY5 440 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 BHLHA9Q7RTU4 235 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 ZNF677Q86XU0 584 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 FMNL3Q8IVF7 1028 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 RIN3Q8TB24 985 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 CSGALNACT1Q8TDX6 532 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 OSCP1Q8WVF1 389 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 NAP1L5Q96NT1 182 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-206ENST00000439717 NOX5Q96PH1 765 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 FAM83CQ9BQN1 747 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 LRFN3Q9BTN0 628 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 MFSD1Q9H3U5 465 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 NLRC4Q9NPP4 1024 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 GKN1Q9NS71 199 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 DNMT3LQ9UJW3 386 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 CA14Q9ULX7 337 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 CEP83Q9Y592 693 aa12.41□□□□□ -0.42
HSPG2-206ENST00000439717 E2F8A0AVK6 867 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 MAN2B1O00754 1011 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 SLC9A3R1O14745 358 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 SART1O43290 800 aaKnown RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 GABBR2O75899 941 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 IFNAR2P48551 515 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 CLCN5P51795 746 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 SNX16P57768 344 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 ZXDBP98169 803 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 GOLGA8FQ08AF8 430 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 GOLGA8DPQ0D2H9 430 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 PDCLQ13371 301 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 C10orf120Q5SQS8 335 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 BTBD8Q5XKL5 378 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 HFE2Q6ZVN8 426 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 CACNA2D4Q7Z3S7 1137 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 TMEM110Q86TL2 294 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 SUGP1Q8IWZ8 645 aaKnown RBP12.4□□□□□ -0.42
HSPG2-206ENST00000439717 WDTC1Q8N5D0 677 aa12.4□□□□□ -0.42
HSPG2-206ENST00000439717 GOLGA1Q92805 767 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms