RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 DMAP1Q9NPF5 467 aaPredicted RBP23.1■■□□□ 1.29
VSX1-205ENST00000429762 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.1■■□□□ 1.29
VSX1-205ENST00000429762 COX16Q9P0S2 106 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 SYN3O14994 580 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 MCM3P25205 808 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 SULT1E1P49888 294 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 MMRN1Q13201 1228 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 DCAF6Q58WW2 860 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 ZC3H12AQ5D1E8 599 aaKnown RBP23.09■■□□□ 1.29
VSX1-205ENST00000429762 SDHAF4Q5VUM1 108 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 SYPL2Q5VXT5 272 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 JAMLQ86YT9 394 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 IFT20Q8IY31 132 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 CCDC105Q8IYK2 499 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 TMEM175Q9BSA9 504 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 C11orf84Q9BUA3 381 aaPredicted RBP23.09■■□□□ 1.29
VSX1-205ENST00000429762 MAGEB5Q9BZ81 275 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 CWH43Q9H720 699 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 NFU1Q9UMS0 254 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 NAALADL1Q9UQQ1 740 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 SF3B1O75533 1304 aaKnown RBP eCLIP23.09■■□□□ 1.29
VSX1-205ENST00000429762 KIAA0355O15063 1070 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 TUBBP07437 444 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 EN2P19622 333 aaPredicted RBP23.09■■□□□ 1.29
VSX1-205ENST00000429762 FGFR3P22607 806 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 PTPN9P43378 593 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 GPR15P49685 360 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 MAPRE1Q15691 268 aaKnown RBP23.09■■□□□ 1.29
VSX1-205ENST00000429762 CA9Q16790 459 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 TFDP3Q5H9I0 405 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 OTUD1Q5VV17 481 aaPredicted RBP23.09■■□□□ 1.29
VSX1-205ENST00000429762 MAATS1Q7Z4T9 603 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 SCN4BQ8IWT1 228 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 C12orf50Q8NA57 414 aaPredicted RBP23.09■■□□□ 1.29
VSX1-205ENST00000429762 SCAMP5Q8TAC9 235 aa23.09■■□□□ 1.29
VSX1-205ENST00000429762 HNRNPLLQ8WVV9 542 aaKnown RBP23.09■■□□□ 1.29
VSX1-205ENST00000429762 GRIK1P39086 918 aa23.08■■□□□ 1.29
VSX1-205ENST00000429762 CETN2P41208 172 aa23.08■■□□□ 1.29
VSX1-205ENST00000429762 MATKP42679 507 aa23.08■■□□□ 1.29
VSX1-205ENST00000429762 YWHAZP63104 245 aaKnown RBP23.08■■□□□ 1.29
VSX1-205ENST00000429762 RSPO2Q6UXX9 243 aaPredicted RBP23.08■■□□□ 1.29
VSX1-205ENST00000429762 C4orf50Q6ZRC1 276 aa23.08■■□□□ 1.29
VSX1-205ENST00000429762 BHLHA9Q7RTU4 235 aa23.08■■□□□ 1.29
VSX1-205ENST00000429762 TTC9BQ8N6N2 239 aa23.08■■□□□ 1.29
VSX1-205ENST00000429762 SNRNP25Q9BV90 132 aaKnown RBP23.08■■□□□ 1.29
VSX1-205ENST00000429762 CALN1Q9BXU9 219 aa23.08■■□□□ 1.29
VSX1-205ENST00000429762 PATJQ8NI35 1801 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 DAPK3O43293 454 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 SASH3O75995 380 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 FYNP06241 537 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 TNNT3P45378 269 aaPredicted RBP23.07■■□□□ 1.28
VSX1-205ENST00000429762 CDH6P55285 790 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 PRSS55Q6UWB4 352 aaPredicted RBP23.07■■□□□ 1.28
VSX1-205ENST00000429762 CMASQ8NFW8 434 aaPredicted RBP23.07■■□□□ 1.28
VSX1-205ENST00000429762 ADAM32Q8TC27 787 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 MAIP1Q8WWC4 291 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 LRRC19Q9H756 370 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.07■■□□□ 1.28
VSX1-205ENST00000429762 FBXO21O94952 628 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 ZBED1O96006 694 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 COPS2P61201 443 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 WDR5P61964 334 aaKnown RBP23.07■■□□□ 1.28
VSX1-205ENST00000429762 MRPL58Q14197 206 aaKnown RBP23.07■■□□□ 1.28
VSX1-205ENST00000429762 PPP2R5EQ16537 467 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 SPOUT1Q5T280 376 aaKnown RBP23.07■■□□□ 1.28
VSX1-205ENST00000429762 DCP1BQ8IZD4 617 aaKnown RBP23.07■■□□□ 1.28
VSX1-205ENST00000429762 CCDC185Q8N715 623 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 EDEM1Q92611 657 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 RUBCNQ92622 972 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 TOP1MTQ969P6 601 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 CNGB3Q9NQW8 809 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 SAE1Q9UBE0 346 aaPredicted RBP23.07■■□□□ 1.28
VSX1-205ENST00000429762 PCYOX1Q9UHG3 505 aa23.07■■□□□ 1.28
VSX1-205ENST00000429762 DHX34Q14147 1143 aaKnown RBP23.06■■□□□ 1.28
VSX1-205ENST00000429762 ZNF280DQ6N043 979 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 MFSD5Q6N075 450 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 ARCQ7LC44 396 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 OTOP2Q7RTS6 562 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 RFX6Q8HWS3 928 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 AENQ8WTP8 325 aaKnown RBP23.06■■□□□ 1.28
VSX1-205ENST00000429762 CENPIQ92674 756 aaPredicted RBP23.06■■□□□ 1.28
VSX1-205ENST00000429762 SLC2A13Q96QE2 648 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 VN1R3Q9BXE9 311 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 UBXN6Q9BZV1 441 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 NEUROG2Q9H2A3 272 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 TMPRSS4Q9NRS4 437 aa23.06■■□□□ 1.28
VSX1-205ENST00000429762 ABHD14A-ACY1A0A1B0GW23 586 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 BHMG1C9JSJ3 638 aaPredicted RBP23.05■■□□□ 1.28
VSX1-205ENST00000429762 SOAT2O75908 522 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 TJP3O95049 919 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 AMHP03971 560 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 FAM153BP0C7A2 387 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 PTPN7P35236 360 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 FNTAP49354 379 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 KRT81Q14533 505 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 DDR2Q16832 855 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 FAM153CQ494X1 144 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 FAM43BQ6ZT52 329 aaPredicted RBP23.05■■□□□ 1.28
VSX1-205ENST00000429762 FAM131BQ86XD5 332 aa23.05■■□□□ 1.28
VSX1-205ENST00000429762 ATAD1Q8NBU5 361 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms