RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CACNA1HO95180 2353 aa9.81□□□□□ -0.84
NUP50-206ENST00000422489 TICRRQ7Z2Z1 1910 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 A0A1W2PQH9 124 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 TRIM49BA6NDI0 452 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 TBC1D3BA6NDS4 549 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 BIN1O00499 593 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 CYP26A1O43174 497 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 GADD45BO75293 160 aaPredicted RBP9.8□□□□□ -0.84
NUP50-206ENST00000422489 APODP05090 189 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 ZDHHC11BP0C7U3 371 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 RARGP13631 454 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 TIE1P35590 1138 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 PMS1P54277 932 aaKnown RBP9.8□□□□□ -0.84
NUP50-206ENST00000422489 KDSRQ06136 332 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 CCDC40Q4G0X9 1142 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 CBWD6Q4V339 395 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 CBWD3Q5JTY5 395 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 CBWD5Q5RIA9 395 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 EMC10Q5UCC4 262 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 SNX30Q5VWJ9 437 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 SYT13Q7L8C5 426 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 DGLUCYQ7Z3D6 616 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 CACNA2D4Q7Z3S7 1137 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 TMEM25Q86YD3 366 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 BBS7Q8IWZ6 715 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 TTC39CQ8N584 583 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 CAMKK1Q8N5S9 505 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
NUP50-206ENST00000422489 GAB3Q8WWW8 586 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 ACDQ96AP0 544 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 GTPBP4Q9BZE4 634 aaKnown RBP9.8□□□□□ -0.84
NUP50-206ENST00000422489 NMUR1Q9HB89 426 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 ARHGEF4Q9NR80 690 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 NAGPAQ9UK23 515 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 LSM7Q9UK45 103 aaKnown RBP9.8□□□□□ -0.84
NUP50-206ENST00000422489 CIZ1Q9ULV3 898 aaPredicted RBP9.8□□□□□ -0.84
NUP50-206ENST00000422489 SCML2Q9UQR0 700 aa9.8□□□□□ -0.84
NUP50-206ENST00000422489 FAM92AA1XBS5 289 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 PRR5-ARHGAP8B1AHC4 643 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 HHLA1C9JL84 531 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 PSMA7O14818 248 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 MDM4O15151 490 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 SLC16A3O15427 465 aaKnown RBP9.79□□□□□ -0.84
NUP50-206ENST00000422489 KAT7O95251 611 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 APBB3O95704 486 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 HMBSP08397 361 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 CD19P15391 556 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 TGM1P22735 817 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 PLA2G4AP47712 749 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 RAD23BP54727 409 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 SLC8A3P57103 927 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 ARHGAP8P85298 464 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 LMNB2Q03252 620 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 LRRC63Q05C16 580 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 GOLGA8FQ08AF8 430 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 GOLGA8DPQ0D2H9 430 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 PUM1Q14671 1186 aaKnown RBP eCLIP9.79□□□□□ -0.84
NUP50-206ENST00000422489 CCDC6Q16204 474 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 GAB4Q2WGN9 574 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 COBLL1Q53SF7 1204 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 C10orf120Q5SQS8 335 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 TPGS1Q6ZTW0 290 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 KBTBD6Q86V97 674 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 C12orf40Q86WS4 652 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 MIB1Q86YT6 1006 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 SFTPA1Q8IWL2 248 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 PGBD3Q8N328 593 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 KIAA1958Q8N8K9 716 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 SLC4A11Q8NBS3 891 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 TSTD1Q8NFU3 115 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 USP33Q8TEY7 942 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 DHTKD1Q96HY7 919 aaPredicted RBP9.79□□□□□ -0.84
NUP50-206ENST00000422489 ZFRQ96KR1 1074 aaKnown RBP9.79□□□□□ -0.84
NUP50-206ENST00000422489 ARID3AQ99856 593 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 KLF16Q9BXK1 252 aaPredicted RBP9.79□□□□□ -0.84
NUP50-206ENST00000422489 TPSD1Q9BZJ3 242 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 ARRDC1-AS1Q9H2J1 176 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 ZDHHC4Q9NPG8 344 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 SPHK2Q9NRA0 654 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 SEMA4GQ9NTN9 838 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 OSER1Q9NX31 292 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 DEC1Q9P2X7 70 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 MAN1B1Q9UKM7 699 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.79□□□□□ -0.84
NUP50-206ENST00000422489 COL4A2P08572 1712 aa9.79□□□□□ -0.84
NUP50-206ENST00000422489 CCDC163A0A0D9SF12 145 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.78□□□□□ -0.84
NUP50-206ENST00000422489 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.78□□□□□ -0.84
NUP50-206ENST00000422489 DCLK1O15075 740 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 KLF8O95600 359 aaPredicted RBP9.78□□□□□ -0.84
NUP50-206ENST00000422489 RALAP11233 206 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 SDHBP21912 280 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 GBP1P32455 592 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 GRIA2P42262 883 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 TNFRSF4P43489 277 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 TUBP50607 506 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 KIF11P52732 1056 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 STX17P56962 302 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 MCCD1P59942 119 aaPredicted RBP9.78□□□□□ -0.84
NUP50-206ENST00000422489 MRPS21P82921 87 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms