RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 DIO1P49895 249 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 RENBPP51606 427 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 COPAP53621 1224 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 C21orf58P58505 322 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 LMAN2Q12907 356 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 SLC35G1Q2M3R5 365 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 FAM209BQ5JX69 171 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 CLEC9AQ6UXN8 241 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 KIAA0408Q6ZU52 694 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 SDR16C5Q8N3Y7 309 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 OR2C3Q8N628 320 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 IPCEF1Q8WWN9 437 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 DDB2Q92466 427 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 CCDC136Q96JN2 1154 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 HIST1H2AAQ96QV6 131 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 MMS19Q96T76 1030 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 INO80BQ9C086 356 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 HEYLQ9NQ87 328 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 TCRBV5S1A1TA0A578 114 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 CES2O00748 559 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 AREL1O15033 823 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 KCNQ3O43525 872 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 EXOC3O60645 756 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 INMTO95050 263 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 CCDC181Q5TID7 509 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 RAP1GAP2Q684P5 730 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 GRHL2Q6ISB3 625 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 TRIM72Q6ZMU5 477 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 ZNF66Q6ZN08 573 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 CATSPERGQ6ZRH7 1159 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 PTCHD4Q6ZW05 846 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 ZNF804AQ7Z570 1209 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 BCDIN3DQ7Z5W3 292 aaKnown RBP5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 CHSY1Q86X52 802 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 TERB1Q8NA31 727 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 HASPINQ8TF76 798 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 KIAA1191Q96A73 305 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 RITA1Q96K30 269 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 FAM227BQ96M60 508 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 CIPCQ9C0C6 399 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 SLC25A32Q9H2D1 315 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 STARD7Q9NQZ5 370 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 AMFRQ9UKV5 643 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 MAN2B2Q9Y2E5 1009 aa5.33□□□□□ -1.56
HMGB1P49-201ENST00000418882 COL15A1P39059 1388 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 LINC01548A6NM66 108 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 CBFA2T3O75081 653 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 LATS1O95835 1130 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 DLDP09622 509 aaKnown RBP5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 NBPF7P0C2Y1 421 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 YY1P25490 414 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 MST1P26927 711 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 RBL1P28749 1068 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 MTHFSP49914 203 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 HOXA4Q00056 320 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 MTAPQ13126 283 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 AWAT1Q58HT5 328 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 PRAMEF17Q5VTA0 474 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 ABLIM2Q6H8Q1 611 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 CCSAPQ6IQ19 270 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 SYCE2Q6PIF2 218 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 SIRT6Q8N6T7 355 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 LINC01465Q8N7H1 131 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 GLIS1Q8NBF1 620 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 SMCR8Q8TEV9 937 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 NELL1Q92832 810 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 C18orf8Q96DM3 657 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 ZDHHC12Q96GR4 267 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 PRR11Q96HE9 360 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 ZC3H10Q96K80 434 aaKnown RBP5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 SNX18Q96RF0 628 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 PCDHGB2Q9Y5G2 931 aa5.32□□□□□ -1.56
HMGB1P49-201ENST00000418882 FAM234BA2RU67 622 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 PSMD9O00233 223 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 FGF18O76093 207 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 APEHP13798 732 aaKnown RBP5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 CREB1P16220 341 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 FOXF2Q12947 444 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 CCDC142Q17RM4 750 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 TBC1D25Q3MII6 688 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 CCDC28AQ8IWP9 274 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 CCDC146Q8IYE0 955 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 SEMA6DQ8NFY4 1073 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 MBD3L2Q8NHZ7 208 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 ZNF668Q96K58 619 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 TRIM36Q9NQ86 728 aa5.31□□□□□ -1.56
HMGB1P49-201ENST00000418882 CA12O43570 354 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 PRKCGP05129 697 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 MYCLP12524 364 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 MYL4P12829 197 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 PECAM1P16284 738 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 CD38P28907 300 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SERPINB3P29508 390 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 AK2P54819 239 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SUMO2P61956 95 aaKnown RBP5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 PICALMQ13492 652 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 ARL13BQ3SXY8 428 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SYCP2LQ5T4T6 812 aa5.3□□□□□ -1.56
HMGB1P49-201ENST00000418882 SUMO4Q6EEV6 95 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms