RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 NKX3-2P78367 333 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 ZNF200P98182 395 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 SRSF2Q01130 221 aaKnown RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 DEUP1Q05D60 604 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 ITGA7Q13683 1181 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 TRIM29Q14134 588 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 MBTPS1Q14703 1052 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 PLCL1Q15111 1095 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 NONOQ15233 471 aaKnown RBP eCLIP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 DGKDQ16760 1214 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 LETM2Q2VYF4 491 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 ZACNQ401N2 412 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 SLC30A6Q6NXT4 461 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 METTL7BQ6UX53 244 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 LRRC31Q6UY01 552 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 VN1R5Q7Z5H4 357 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 DAAM2Q86T65 1068 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 GALNT15Q8N3T1 639 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CARNMT1Q8N4J0 409 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CCDC33Q8N5R6 958 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 SIMC1Q8NDZ2 872 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 OR8H1Q8NGG4 311 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 PPTC7Q8NI37 304 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 TRIM43Q96BQ3 446 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CENPTQ96BT3 561 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CGRRF1Q99675 332 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 GPR20Q99678 358 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 LLPHQ9BRT6 129 aaKnown RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 CRACR2AQ9BSW2 395 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 MTG1Q9BT17 334 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 POLR3CQ9BUI4 534 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 TRPV6Q9H1D0 765 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 TTC12Q9H892 705 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 JPH1Q9HDC5 661 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 PLSCR4Q9NRQ2 329 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 NDFIP2Q9NV92 336 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 DACT1Q9NYF0 836 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 UTP6Q9NYH9 597 aaKnown RBP4.86□□□□□ -1.63
SF3B1-202ENST00000409915 SLC9A2Q9UBY0 812 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 PYCARDQ9ULZ3 195 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 RABL2BQ9UNT1 228 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 SRPK3Q9UPE1 567 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 SIK3Q9Y2K2 1263 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 Q9Y3F1 56 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 GPR45Q9Y5Y3 372 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 UMODL1Q5DID0 1318 aa4.86□□□□□ -1.63
SF3B1-202ENST00000409915 GSTTP1A0A1W2PQM5 241 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 DCDC2BA2VCK2 349 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PGPEP1LA6NFU8 196 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 DCDC2CA8MYV0 355 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 SHISA8B8ZZ34 492 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 J3QW42 95 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 IPO5O00410 1097 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PES1O00541 588 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CHUKO15111 745 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 DHX15O43143 795 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 HOXC11O43248 304 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CCNT1O60563 726 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 USO1O60763 962 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 SOAT2O75908 522 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 NEBLO76041 1014 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 FGF18O76093 207 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 RTN3O95197 1032 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 SLU7O95391 586 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PAPLNO95428 1278 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 HSPA4LO95757 839 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 SCG5P05408 212 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CLTBP09497 229 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ESRRAP11474 423 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 HARSP12081 509 aaKnown RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ITGA4P13612 1032 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ATP6V1B1P15313 513 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 TSHRP16473 764 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ATF7P17544 494 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 GBP1P32455 592 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CIITAP33076 1130 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 LSP1P33241 339 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 TCF7P36402 384 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 MAGEA10P43363 369 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ALDH9A1P49189 494 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 MCM2P49736 904 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CDK7P50613 346 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ITGA8P53708 1063 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 NR1H2P55055 460 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 GPR85P60893 370 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 ACTR2P61160 394 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CTBSQ01459 385 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CDC16Q13042 620 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 CUL4AQ13619 759 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PDCD1Q15116 288 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PTPN14Q15678 1187 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 PFKFB4Q16877 469 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 MPEG1Q2M385 716 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 SAMD5Q5TGI4 173 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 MCTP1Q6DN14 999 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 DENND5AQ6IQ26 1287 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 GALNT17Q6IS24 598 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 JMJD6Q6NYC1 403 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-202ENST00000409915 KCNV1Q6PIU1 500 aa4.85□□□□□ -1.63
SF3B1-202ENST00000409915 GBP6Q6ZN66 633 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms