RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 ZNF200P98182 395 aaPredicted RBP14.91□□□□□ -0.02
GABPA-202ENST00000400075 GTF2BQ00403 316 aa14.91□□□□□ -0.02
GABPA-202ENST00000400075 TSPAN18Q96SJ8 248 aa14.91□□□□□ -0.02
GABPA-202ENST00000400075 CYTH2Q99418 400 aa14.91□□□□□ -0.02
GABPA-202ENST00000400075 NOVA2Q9UNW9 492 aaKnown RBP14.91□□□□□ -0.02
GABPA-202ENST00000400075 HPSEQ9Y251 543 aa14.91□□□□□ -0.02
GABPA-202ENST00000400075 ITM2BQ9Y287 266 aa14.91□□□□□ -0.02
GABPA-202ENST00000400075 XRN1Q8IZH2 1706 aaKnown RBP14.91□□□□□ -0.02
GABPA-202ENST00000400075 CNPY4Q8N129 248 aa14.91□□□□□ -0.02
GABPA-202ENST00000400075 NUP93Q8N1F7 819 aa14.91□□□□□ -0.02
GABPA-202ENST00000400075 SLC13A1Q9BZW2 595 aa14.91□□□□□ -0.02
GABPA-202ENST00000400075 RBM22Q9NW64 420 aaKnown RBP eCLIP14.91□□□□□ -0.02
GABPA-202ENST00000400075 KNDC1Q76NI1 1749 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 DUSP4Q13115 394 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 ZNF268Q14587 947 aaPredicted RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 UGCGQ16739 394 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 IRAK1BP1Q5VVH5 260 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 SYDE1Q6ZW31 735 aaPredicted RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 ZNF669Q96BR6 464 aaPredicted RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 THAP2Q9H0W7 228 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 GOLPH3Q9H4A6 298 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 POPDC2Q9HBU9 364 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 AMACRQ9UHK6 382 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 USP18Q9UMW8 372 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 CCNE2O96020 404 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 CTSEP14091 401 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 NPR3P17342 541 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 ARHGAP25P42331 645 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 POLR2LP62875 67 aaKnown RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 IL1RL1Q01638 556 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 TARBP2Q15633 366 aaKnown RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 CCDC85BQ15834 202 aaPredicted RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 C16orf59Q7L2K0 433 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 C18orf25Q96B23 403 aaPredicted RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 PPP1R16AQ96I34 528 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 INTUQ9ULD6 942 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 ABHD14A-ACY1A0A1B0GW23 586 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 LYPLA2O95372 231 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 LRRC52Q8N7C0 313 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 B3GALNT2Q8NCR0 500 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 C7orf43Q8WVR3 580 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 TCF25Q9BQ70 676 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 BBS2Q9BXC9 721 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 CLDND1Q9NY35 253 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 CPSF2Q9P2I0 782 aaKnown RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 RHOBTB1O94844 696 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 VCPP55072 806 aaKnown RBP14.9□□□□□ -0.02
GABPA-202ENST00000400075 MTF1Q14872 753 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 RBBP7Q16576 425 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 SLC47A2Q86VL8 602 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 LZTR1Q8N653 840 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 LZICQ8WZA0 190 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 LNPEPQ9UIQ6 1025 aa14.9□□□□□ -0.02
GABPA-202ENST00000400075 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
GABPA-202ENST00000400075 LRRIQ3A6PVS8 624 aaPredicted RBP14.89□□□□□ -0.03
GABPA-202ENST00000400075 TISP43B9A030 160 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 MICAL2O94851 1124 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ART3Q13508 389 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.89□□□□□ -0.03
GABPA-202ENST00000400075 GPR158Q5T848 1215 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 OLFML2BQ68BL8 750 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ANKMY2Q8IV38 441 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ZNF784Q8NCA9 323 aaPredicted RBP14.89□□□□□ -0.03
GABPA-202ENST00000400075 ETNPPLQ8TBG4 499 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 LENG9Q96B70 501 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ERLEC1Q96DZ1 483 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 FAM118BQ9BPY3 351 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 XPO7Q9UIA9 1087 aaKnown RBP14.89□□□□□ -0.03
GABPA-202ENST00000400075 ADAM28Q9UKQ2 775 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 VANGL2Q9ULK5 521 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 PLAGL2Q9UPG8 496 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 KCNA1Q09470 495 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ILDR2Q71H61 639 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 FAM71DQ8N9W8 422 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 KIAA0895Q8NCT3 520 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 TEKT4Q8WW24 435 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ELMO2Q96JJ3 720 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 AASDHPPTQ9NRN7 309 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 Q9Y3F1 56 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 RARGP13631 454 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 CCND3P30281 292 aaPredicted RBP14.89□□□□□ -0.03
GABPA-202ENST00000400075 SPARCL1Q14515 664 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 NFIL3Q16649 462 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ZCCHC2Q9C0B9 1178 aaKnown RBP14.89□□□□□ -0.03
GABPA-202ENST00000400075 TXNRD2Q9NNW7 524 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 NSMCE4AQ9NXX6 385 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 C1QTNF3-AMACRE9PGA6 284 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 CRTAMO95727 393 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 ADH1CP00326 375 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 FDFT1P37268 417 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 FUT10Q6P4F1 479 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 MYLPFQ96A32 169 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 CELF6Q96J87 481 aaKnown RBP14.89□□□□□ -0.03
GABPA-202ENST00000400075 SMYD3Q9H7B4 428 aa14.89□□□□□ -0.03
GABPA-202ENST00000400075 IFRD1O00458 451 aaPredicted RBP14.88□□□□□ -0.03
GABPA-202ENST00000400075 EOMESO95936 686 aa14.88□□□□□ -0.03
GABPA-202ENST00000400075 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
GABPA-202ENST00000400075 CLEC4DQ8WXI8 215 aa14.88□□□□□ -0.03
GABPA-202ENST00000400075 HSFY1Q96LI6 401 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms