RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MAP3K13O43283 966 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 TOP3BO95985 862 aaKnown RBP14.63□□□□□ -0.07
CXCL12-202ENST00000374426 TUBP50607 506 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 SLC5A3P53794 718 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 GAD2Q05329 585 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 BMT2Q1RMZ1 405 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 UAP1L1Q3KQV9 507 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 HECTD3Q5T447 861 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 UNC13DQ70J99 1090 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 SYT12Q8IV01 421 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 BBS7Q8IWZ6 715 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 C12orf56Q8IXR9 622 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 NAT16Q8N8M0 369 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 WBP2Q969T9 261 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 ELMO3Q96BJ8 720 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 DUSP9Q99956 384 aaKnown RBP14.63□□□□□ -0.07
CXCL12-202ENST00000374426 TMEM121BQ9BXQ6 578 aaPredicted RBP14.63□□□□□ -0.07
CXCL12-202ENST00000374426 RALYQ9UKM9 306 aaKnown RBP14.63□□□□□ -0.07
CXCL12-202ENST00000374426 TNRC6BQ9UPQ9 1833 aaKnown RBP14.62□□□□□ -0.07
CXCL12-202ENST00000374426 TBC1D3BA6NDS4 549 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 CUTAO60888 179 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 PHACTR2O75167 634 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 TULP3O75386 442 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 ZDHHC11BP0C7U3 371 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 PGFP49763 221 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 LMAN2Q12907 356 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 ZNF699Q32M78 642 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 SPDYCQ5MJ68 293 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 TMEM25Q86YD3 366 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 FUKQ8N0W3 1084 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 DEFB124Q8NES8 71 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 MED10Q9BTT4 135 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 SDCBP2Q9H190 292 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 BLZF1Q9H2G9 400 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 SLC39A2Q9NP94 309 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 DMAP1Q9NPF5 467 aaPredicted RBP14.62□□□□□ -0.07
CXCL12-202ENST00000374426 SPHK2Q9NRA0 654 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 GMIPQ9P107 970 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 CGNQ9P2M7 1197 aaKnown RBP14.62□□□□□ -0.07
CXCL12-202ENST00000374426 DEC1Q9P2X7 70 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 HCN2Q9UL51 889 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 SH3BP1Q9Y3L3 701 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 ANKRD11Q6UB99 2663 aaPredicted RBP14.62□□□□□ -0.07
CXCL12-202ENST00000374426 PLXND1Q9Y4D7 1925 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 ATP8B3O60423 1300 aa14.62□□□□□ -0.07
CXCL12-202ENST00000374426 ATXN2Q99700 1313 aaKnown RBP14.62□□□□□ -0.07
CXCL12-202ENST00000374426 TRIM24O15164 1050 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 POLR2DO15514 142 aaKnown RBP14.61□□□□□ -0.07
CXCL12-202ENST00000374426 EXOC3O60645 756 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 YEATS4O95619 227 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 ENGP17813 658 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 ITPKAP23677 461 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 MAPK8P45983 427 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 CLDN10P78369 228 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 BIRC3Q13489 604 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 NCOA4Q13772 614 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 BYSLQ13895 437 aaKnown RBP14.61□□□□□ -0.07
CXCL12-202ENST00000374426 KNOP1Q1ED39 458 aaKnown RBP14.61□□□□□ -0.07
CXCL12-202ENST00000374426 PEAR1Q5VY43 1037 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-202ENST00000374426 LYSMD4Q5XG99 296 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 BTBD8Q5XKL5 378 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 SLC23A3Q6PIS1 610 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 SCARA5Q6ZMJ2 495 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 MIB1Q86YT6 1006 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 PGBD3Q8N328 593 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 ZNF513Q8N8E2 541 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-202ENST00000374426 TERB1Q8NA31 727 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 KDF1Q8NAX2 398 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-202ENST00000374426 ZMIZ2Q8NF64 920 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 KCNV2Q8TDN2 545 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 PARD3BQ8TEW8 1205 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 SMARCD1Q96GM5 515 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 TNIP3Q96KP6 325 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 ZNF396Q96N95 335 aaPredicted RBP14.61□□□□□ -0.07
CXCL12-202ENST00000374426 NUSAP1Q9BXS6 441 aaKnown RBP14.61□□□□□ -0.07
CXCL12-202ENST00000374426 ADAM33Q9BZ11 813 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 MAGEF1Q9HAY2 307 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 KRT82Q9NSB4 513 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 PILRBQ9UKJ0 227 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 ZMIZ1Q9ULJ6 1067 aa14.61□□□□□ -0.07
CXCL12-202ENST00000374426 LAMA5O15230 3695 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 LRRIQ3A6PVS8 624 aaPredicted RBP14.6□□□□□ -0.07
CXCL12-202ENST00000374426 GREM1O60565 184 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 AP1G2O75843 785 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 BEST1O76090 585 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 VNN1O95497 513 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 C4BPAP04003 597 aaKnown RBP14.6□□□□□ -0.07
CXCL12-202ENST00000374426 IRF1P10914 325 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 GABRG2P18507 467 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 ANO4Q32M45 955 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 ZNF667Q5HYK9 610 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 C10orf76Q5T2E6 689 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 TRMT11Q7Z4G4 463 aaKnown RBP14.6□□□□□ -0.07
CXCL12-202ENST00000374426 ACOT1Q86TX2 421 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 SMOQ99835 787 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 SCNM1Q9BWG6 230 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 CD248Q9HCU0 757 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 FSCN3Q9NQT6 498 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 COMMD8Q9NX08 183 aa14.6□□□□□ -0.07
CXCL12-202ENST00000374426 HMGXB4Q9UGU5 601 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms