RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 ANKRD22Q5VYY1 191 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 PAXIP1Q6ZW49 1069 aaPredicted RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 CYP4V2Q6ZWL3 525 aaPredicted RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 DPH6Q7L8W6 267 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 ANKMY2Q8IV38 441 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 PSTKQ8IV42 348 aaKnown RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 CRYBG2Q8N1P7 616 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 ZBTB10Q96DT7 871 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 PEBP4Q96S96 227 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 ABCF3Q9NUQ8 709 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 PHTF1Q9UMS5 762 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 SNX9Q9Y5X1 595 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 GOLGA8MH3BSY2 632 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 EDF1O60869 148 aaKnown RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 UBOX5O94941 541 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 ZBED1O96006 694 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 KRT4P19013 534 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 CYP3A5P20815 502 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 ZNF200P98182 395 aaPredicted RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 BST2Q10589 180 aaKnown RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 PPP1R26Q5T8A7 1209 aaPredicted RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 SLC26A9Q7LBE3 791 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 ANKRD52Q8NB46 1076 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 FAM172AQ8WUF8 416 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 MAML3Q96JK9 1138 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 TINF2Q9BSI4 451 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 PCDH18Q9HCL0 1135 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 MLXIPLQ9NP71 852 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 RCOR3Q9P2K3 495 aaPredicted RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 ZNF180Q9UJW8 692 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 TEX264Q9Y6I9 313 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 SLC15A5A6NIM6 579 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 A6NJR5 290 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 HNRNPCL1O60812 293 aaKnown RBP18.81■□□□□ 0.6
CD40-201ENST00000372276 SPAG7O75391 227 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 CSDE1O75534 798 aaKnown RBP18.81■□□□□ 0.6
CD40-201ENST00000372276 MT-ND3P03897 115 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 SMPD1P17405 629 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 SSTR1P30872 391 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 ELF3P78545 371 aaPredicted RBP18.81■□□□□ 0.6
CD40-201ENST00000372276 SPRED3Q2MJR0 410 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 FAM133BQ5BKY9 247 aaKnown RBP18.81■□□□□ 0.6
CD40-201ENST00000372276 PMF1Q6P1K2 205 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 ALKAL1Q6UXT8 129 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 PLEKHH3Q7Z736 793 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 DCAKDQ8WVC6 231 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 CENPIQ92674 756 aaPredicted RBP18.81■□□□□ 0.6
CD40-201ENST00000372276 RAB3IPQ96QF0 476 aaPredicted RBP18.81■□□□□ 0.6
CD40-201ENST00000372276 PARK7Q99497 189 aaKnown RBP18.81■□□□□ 0.6
CD40-201ENST00000372276 FERMT1Q9BQL6 677 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 TRIM6Q9C030 488 aaPredicted RBP18.81■□□□□ 0.6
CD40-201ENST00000372276 ECT2Q9H8V3 914 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 USP29Q9HBJ7 922 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 GDAP2Q9NXN4 497 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 GTF2IRD1Q9UHL9 959 aa18.81■□□□□ 0.6
CD40-201ENST00000372276 CCL15-CCL14A0A0B4J2E2 113 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 HACD1B0YJ81 288 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 TMEM63AO94886 807 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 INHBAP08476 426 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 TROVE2P10155 538 aaKnown RBP eCLIP18.8■□□□□ 0.6
CD40-201ENST00000372276 NQO1P15559 274 aaKnown RBP18.8■□□□□ 0.6
CD40-201ENST00000372276 HOXA11P31270 313 aaPredicted RBP18.8■□□□□ 0.6
CD40-201ENST00000372276 RPA3P35244 121 aaPredicted RBP18.8■□□□□ 0.6
CD40-201ENST00000372276 RASSF2P50749 326 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 SLC8A3P57103 927 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 SARNPP82979 210 aaKnown RBP18.8■□□□□ 0.6
CD40-201ENST00000372276 TAF5Q15542 800 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 DPYSL2Q16555 572 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 CCL15Q16663 113 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 EFHC1Q5JVL4 640 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 GJC2Q5T442 439 aaPredicted RBP18.8■□□□□ 0.6
CD40-201ENST00000372276 C9orf57Q5W0N0 161 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 SCYL2Q6P3W7 929 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 GPR142Q7Z601 462 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 ACOT1Q86TX2 421 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 HACE1Q8IYU2 909 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 OR6B3Q8NGW1 331 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 SLC44A1Q8WWI5 657 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 TUBB6Q9BUF5 446 aa18.8■□□□□ 0.6
CD40-201ENST00000372276 NGRNQ9NPE2 291 aaKnown RBP18.8■□□□□ 0.6
CD40-201ENST00000372276 MBLAC1A4D2B0 266 aaPredicted RBP18.79■□□□□ 0.6
CD40-201ENST00000372276 A8MXQ7 604 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 BTBD19C9JJ37 291 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 GCATO75600 419 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 CCNB1P14635 433 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 DARSP14868 501 aaKnown RBP18.79■□□□□ 0.6
CD40-201ENST00000372276 KCNE1P15382 129 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 TPSB2P20231 275 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 ELK3P41970 407 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 NCALDP61601 193 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 TPSAB1Q15661 275 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 ZKSCAN8Q15776 578 aaPredicted RBP18.79■□□□□ 0.6
CD40-201ENST00000372276 FAM110CQ1W6H9 321 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 C15orf59Q2T9L4 293 aaPredicted RBP18.79■□□□□ 0.6
CD40-201ENST00000372276 MSS51Q4VC12 460 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 HP1BP3Q5SSJ5 553 aaPredicted RBP18.79■□□□□ 0.6
CD40-201ENST00000372276 STRADAQ7RTN6 431 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 RPAINQ86UA6 219 aa18.79■□□□□ 0.6
CD40-201ENST00000372276 ZC3H18Q86VM9 953 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms