RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 C2CD2LO14523 706 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 TLL1O43897 1013 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 LILRB3O75022 631 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 FGF18O76093 207 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 MYOGP15173 224 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 SCNN1AP37088 669 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 GPR15P49685 360 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 ARPP19P56211 112 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 SLC8A3P57103 927 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 RNASE9P60153 205 aaKnown RBP15.4■□□□□ 0.06
CXCL12-201ENST00000343575 MRPS5P82675 430 aaKnown RBP15.4■□□□□ 0.06
CXCL12-201ENST00000343575 SHHQ15465 462 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 NFE2Q16621 373 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-201ENST00000343575 SH3PXD2AQ5TCZ1 1133 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 HFE2Q6ZVN8 426 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 KLHL23Q8NBE8 558 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 AUTS2Q8WXX7 1259 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 IP6K2Q9UHH9 426 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 GOLGA8KD6RF30 607 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 EBAG9O00559 213 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 OPA1O60313 960 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 OR1D2P34982 312 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 CTNNA1P35221 906 aaKnown RBP15.39■□□□□ 0.05
CXCL12-201ENST00000343575 ROR1Q01973 937 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 VPS52Q8N1B4 723 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 STKLD1Q8NE28 680 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 SCAMP5Q8TAC9 235 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 ULBP1Q9BZM6 244 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 LRRC4Q9HBW1 653 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 PNPLA8Q9NP80 782 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 EHD2Q9NZN4 543 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 PCDHB5Q9Y5E4 795 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 USP3Q9Y6I4 520 aa15.39■□□□□ 0.05
CXCL12-201ENST00000343575 PLXNA4Q9HCM2 1894 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 LINC01553A4QN01 128 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 SOAT2O75908 522 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 FYNP06241 537 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 CPB1P15086 417 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 TFE3P19532 575 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-201ENST00000343575 MAN1A1P33908 653 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 PPM1AP35813 382 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 SLC1A1P43005 524 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 MAGEA11P43364 429 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 GLUD2P49448 558 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 DAOAP59103 153 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 DDR2Q16832 855 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 CCDC14Q49A88 953 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 SDHAF4Q5VUM1 108 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 TXNRD3NBQ6F5E7 133 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 PM20D1Q6GTS8 502 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 CCNI2Q6ZMN8 369 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-201ENST00000343575 RXFP2Q8WXD0 754 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 MS4A14Q96JA4 679 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 C11orf84Q9BUA3 381 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-201ENST00000343575 OXCT2Q9BYC2 517 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-201ENST00000343575 SMARCAL1Q9NZC9 954 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 CHD7Q9P2D1 2997 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 SLC27A5Q9Y2P5 690 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 PCDHB12Q9Y5F1 795 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 PCDHA3Q9Y5H8 950 aa15.38■□□□□ 0.05
CXCL12-201ENST00000343575 YJEFN3A6XGL0 299 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 E7ENQ6 273 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 KCNK3O14649 394 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 SPOPO43791 374 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 LRCH4O75427 683 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 USP17L7P0C7H9 530 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 TCP1P17987 556 aaKnown RBP15.37■□□□□ 0.05
CXCL12-201ENST00000343575 CTNNA2P26232 953 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 BMPR1AP36894 532 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 GRIK1P39086 918 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 PGFP49763 221 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 ZNF143P52747 638 aaPredicted RBP15.37■□□□□ 0.05
CXCL12-201ENST00000343575 SNX16P57768 344 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 PIGHQ14442 188 aaPredicted RBP15.37■□□□□ 0.05
CXCL12-201ENST00000343575 KIAA1841Q6NSI8 718 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 FOXR1Q6PIV2 292 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 VSTM1Q6UX27 236 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 ARCQ7LC44 396 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 CFAP57Q96MR6 1250 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 ZBP1Q9H171 429 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 CNGB3Q9NQW8 809 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 AAASQ9NRG9 546 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 COL4A4P53420 1690 aaPredicted RBP15.37■□□□□ 0.05
CXCL12-201ENST00000343575 CARNS1A5YM72 827 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 GOLGA6CA6NDK9 693 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 MIF4GDA9UHW6 222 aaKnown RBP15.37■□□□□ 0.05
CXCL12-201ENST00000343575 ABLIM3O94929 683 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 GOLGA6DP0CG33 693 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 PDGFRAP16234 1089 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 PSMA2P25787 234 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 SLC5A3P53794 718 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 C15orf59Q2T9L4 293 aaPredicted RBP15.37■□□□□ 0.05
CXCL12-201ENST00000343575 ATP13A4Q4VNC1 1196 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 AADACL2Q6P093 401 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 ZNF572Q7Z3I7 529 aaPredicted RBP15.37■□□□□ 0.05
CXCL12-201ENST00000343575 SCN4BQ8IWT1 228 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 CAPZA3Q96KX2 299 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 C8orf48Q96LL4 319 aa15.37■□□□□ 0.05
CXCL12-201ENST00000343575 NCAPGQ9BPX3 1015 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms