RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 PSMC6P62333 389 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 TRIM71Q2Q1W2 868 aaKnown RBP10.71□□□□□ -0.7
SF3B2-201ENST00000322535 TIGD2Q4W5G0 525 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 PLEKHG4Q58EX7 1191 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 IGSF11Q5DX21 431 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 DCAF12L1Q5VU92 463 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 MFSD5Q6N075 450 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 POTEGQ6S5H5 508 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 ARPINQ7Z6K5 226 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 TTC7BQ86TV6 843 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 NT5DC3Q86UY8 548 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 LRRC6Q86X45 466 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 CROCCP3Q8IVE0 287 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 KIAA0895Q8NCT3 520 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 FBXO27Q8NI29 283 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 NSL1Q96IY1 281 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 CIB1Q99828 191 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 WDR11Q9BZH6 1224 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 ZHX3Q9H4I2 956 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 NDUFA13Q9P0J0 144 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 KIAA1024Q9UPX6 916 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 FAM47DPA6NHR8 397 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 hCG_1984214I3L0E3 225 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 MSH4O15457 936 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 SNX2O60749 519 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 ZNF254O75437 659 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 CHN2P52757 468 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 B2MP61769 119 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 ADAM17P78536 824 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 KDSRQ06136 332 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 ASPHQ12797 758 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 TMEM132BQ14DG7 1078 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 HP1BP3Q5SSJ5 553 aaPredicted RBP10.7□□□□□ -0.7
SF3B2-201ENST00000322535 C6orf163Q5TEZ5 329 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 FYB2Q5VWT5 728 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 CYP4F22Q6NT55 531 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 TTC23LQ6PF05 361 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 OTOAQ7RTW8 1153 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 PMM1Q92871 262 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 NMRK2Q9NPI5 230 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 SLC38A7Q9NVC3 462 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 ZNHIT2Q9UHR6 403 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 PCDHGB4Q9UN71 923 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 AFG3L2Q9Y4W6 797 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 PCDHGB5Q9Y5G0 923 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 TRAFD1O14545 582 aaPredicted RBP10.7□□□□□ -0.7
SF3B2-201ENST00000322535 AQP9O43315 295 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 KRT75O95678 551 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 SMIM18P0DKX4 95 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 CPA3P15088 417 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 CA4P22748 312 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 RPL5P46777 297 aaKnown RBP10.7□□□□□ -0.7
SF3B2-201ENST00000322535 THOP1P52888 689 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 FSTL1Q12841 308 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 GRB10Q13322 594 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 BAATQ14032 418 aaPredicted RBP10.7□□□□□ -0.7
SF3B2-201ENST00000322535 TNFAIP8L3Q5GJ75 292 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 CCDC137Q6PK04 289 aaKnown RBP10.7□□□□□ -0.7
SF3B2-201ENST00000322535 CLEC4DQ8WXI8 215 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 LENG9Q96B70 501 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 SERPINB12Q96P63 405 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 PNMA5Q96PV4 448 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 TLE6Q9H808 572 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 PLGRKTQ9HBL7 147 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 SLC38A10Q9HBR0 1119 aa10.7□□□□□ -0.7
SF3B2-201ENST00000322535 MAP3K20Q9NYL2 800 aaKnown RBP10.7□□□□□ -0.7
SF3B2-201ENST00000322535 PCP4L1A6NKN8 68 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 POC1B-GALNT4F8VUJ3 575 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 EML1O00423 815 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 NDC80O14777 642 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 SNPHO15079 494 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 CYP26A1O43174 497 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ICAM1P05362 532 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ENO1P06733 434 aaKnown RBP10.69□□□□□ -0.7
SF3B2-201ENST00000322535 H2AFZP0C0S5 128 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 KRT15P19012 456 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 CRABP2P29373 138 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 GRM1Q13255 1194 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 TRIP10Q15642 601 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 HSP90AA5PQ58FG0 334 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 TTC27Q6P3X3 843 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 H2AFVQ71UI9 128 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 EEPD1Q7L9B9 569 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ITIH5Q86UX2 942 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 FAM160B2Q86V87 743 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 DEPDC4Q8N2C3 294 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 CENPSQ8N2Z9 138 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 RASGEF1CQ8N431 466 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 GALNT4Q8N4A0 578 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 LZTR1Q8N653 840 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 POU5F2Q8N7G0 328 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 PSD4Q8NDX1 1056 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 TOR1AIP2Q8NFQ8 470 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 LILRB4Q8NHJ6 448 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 SHKBP1Q8TBC3 707 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 FAR2Q96K12 515 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 C9orf72Q96LT7 481 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 RUNDC3BQ96NL0 473 aa10.69□□□□□ -0.7
SF3B2-201ENST00000322535 ROPN1BQ9BZX4 212 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms