RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 APBB2Q92870 758 aa26.12■■□□□ 1.77
ROM1-201ENST00000278833 ZNF668Q96K58 619 aaPredicted RBP26.12■■□□□ 1.77
ROM1-201ENST00000278833 RAB3IPQ96QF0 476 aaPredicted RBP26.12■■□□□ 1.77
ROM1-201ENST00000278833 SLC4A5Q9BY07 1137 aa26.12■■□□□ 1.77
ROM1-201ENST00000278833 PDGFCQ9NRA1 345 aa26.12■■□□□ 1.77
ROM1-201ENST00000278833 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.12■■□□□ 1.77
ROM1-201ENST00000278833 GGT7Q9UJ14 662 aa26.12■■□□□ 1.77
ROM1-201ENST00000278833 MCM8Q9UJA3 840 aa26.12■■□□□ 1.77
ROM1-201ENST00000278833 TSPAN16Q9UKR8 245 aa26.12■■□□□ 1.77
ROM1-201ENST00000278833 IQANK1A0A1B0GTG1 560 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 BCLAF3A2AJT9 711 aaKnown RBP26.11■■□□□ 1.77
ROM1-201ENST00000278833 C2CD2LO14523 706 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 MDM4O15151 490 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 PRPSAP2O60256 369 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 TSPAN1O60635 241 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 SLC18A2Q05940 514 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 BBS9Q3SYG4 887 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 CAPN12Q6ZSI9 719 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 ZNF410Q86VK4 478 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 ZDHHC17Q8IUH5 632 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 ACAP3Q96P50 834 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 MYLK2Q9H1R3 596 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 USP29Q9HBJ7 922 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 CHKBQ9Y259 395 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 GSTA2P09210 222 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 PDGFRAP16234 1089 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 SCNN1AP37088 669 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 DCAF4L1Q3SXM0 396 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 SLC45A4Q5BKX6 768 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 TAPT1Q6NXT6 567 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 OLFML1Q6UWY5 402 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 ZNF670Q9BS34 389 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 C10orf88Q9H8K7 445 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 EBF2Q9HAK2 575 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 PLEKHA5Q9HAU0 1116 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 BAIAP2L1Q9UHR4 511 aa26.11■■□□□ 1.77
ROM1-201ENST00000278833 E5RJQ4 531 aa26.1■■□□□ 1.77
ROM1-201ENST00000278833 SNX16P57768 344 aa26.1■■□□□ 1.77
ROM1-201ENST00000278833 BASP1P80723 227 aaKnown RBP26.1■■□□□ 1.77
ROM1-201ENST00000278833 DARS2Q6PI48 645 aaKnown RBP26.1■■□□□ 1.77
ROM1-201ENST00000278833 MAMDC4Q6UXC1 1216 aa26.1■■□□□ 1.77
ROM1-201ENST00000278833 AGGF1Q8N302 714 aaeCLIP26.1■■□□□ 1.77
ROM1-201ENST00000278833 SPOCK2Q92563 424 aa26.1■■□□□ 1.77
ROM1-201ENST00000278833 ZBTB10Q96DT7 871 aa26.1■■□□□ 1.77
ROM1-201ENST00000278833 LRRC37BQ96QE4 947 aa26.1■■□□□ 1.77
ROM1-201ENST00000278833 TRAFD1O14545 582 aaPredicted RBP26.09■■□□□ 1.77
ROM1-201ENST00000278833 HNRNPCL1O60812 293 aaKnown RBP26.09■■□□□ 1.77
ROM1-201ENST00000278833 KRT16P08779 473 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 NEK3P51956 506 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 ZNF792Q3KQV3 632 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 OR6B2Q6IFH4 312 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 SH2D5Q6ZV89 423 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 ARCQ7LC44 396 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 OTOAQ7RTW8 1153 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 TMEM110Q86TL2 294 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 SLCO1B3Q9NPD5 702 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 ZNF180Q9UJW8 692 aa26.09■■□□□ 1.77
ROM1-201ENST00000278833 PDCD11Q14690 1871 aaKnown RBP26.09■■□□□ 1.77
ROM1-201ENST00000278833 C1QAP02745 245 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 HOXD8P13378 290 aaPredicted RBP26.08■■□□□ 1.77
ROM1-201ENST00000278833 ELK3P41970 407 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 MMRN1Q13201 1228 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 CCDC14Q49A88 953 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 FYB2Q5VWT5 728 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 MTHFD1LQ6UB35 978 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 ZNF467Q7Z7K2 595 aaPredicted RBP26.08■■□□□ 1.77
ROM1-201ENST00000278833 ANKRD23Q86SG2 305 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 PLD5Q8N7P1 536 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 UBA3Q8TBC4 463 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 LRRC39Q96DD0 335 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 APOPT1Q96IL0 206 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 CPB2Q96IY4 423 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 WBP1LQ9NX94 342 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 AKT3Q9Y243 479 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 TCRBV9S1A1TA0A576 114 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 PDHXO00330 501 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 CCND1P24385 295 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 IL4RP24394 825 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 GOLGA7BQ2TAP0 167 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 APBB1IPQ7Z5R6 666 aaPredicted RBP26.08■■□□□ 1.77
ROM1-201ENST00000278833 SESTD1Q86VW0 696 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 MCUQ8NE86 351 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 ERP27Q96DN0 273 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 PCDH18Q9HCL0 1135 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 GTF2IRD1Q9UHL9 959 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 RPL26L1Q9UNX3 145 aaKnown RBP26.08■■□□□ 1.77
ROM1-201ENST00000278833 CHMP2BQ9UQN3 213 aa26.08■■□□□ 1.77
ROM1-201ENST00000278833 APOL1O14791 398 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 FGFR1P11362 822 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 DESP17661 470 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 ETV4P43268 484 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 ZNF200P98182 395 aaPredicted RBP26.07■■□□□ 1.76
ROM1-201ENST00000278833 ARHGAP17Q68EM7 881 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 NPNTQ6UXI9 565 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 PQLC3Q8N755 202 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.07■■□□□ 1.76
ROM1-201ENST00000278833 TCP10LQ8TDR4 215 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 C16orf70Q9BSU1 422 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 SAR1AQ9NR31 198 aa26.07■■□□□ 1.76
ROM1-201ENST00000278833 MKS1Q9NXB0 559 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms