RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 KRT31Q15323 416 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 DPY19L2P1Q6NXN4 242 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 TXNDC11Q6PKC3 985 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 ZNF687Q8N1G0 1237 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 NDRG1Q92597 394 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 SECISBP2LQ93073 1101 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 OSBPL6Q9BZF3 934 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 KCNH6Q9H252 994 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 VPS16Q9H269 839 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 ACP6Q9NPH0 428 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 CYLDQ9NQC7 956 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 DNAJC12Q9UKB3 198 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 NUDT5Q9UKK9 219 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 PTPRDP23468 1912 aa18.91■□□□□ 0.62
SNRPA1-201ENST00000254193 BECN2A8MW95 431 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 M0QYV0 167 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 RARGP13631 454 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 PLA2G4AP47712 749 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 RGS7P49802 495 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 NUBP1P53384 320 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 TCF15Q12870 199 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 FZD5Q13467 585 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 STILQ15468 1287 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 EML3Q32P44 896 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 ANO6Q4KMQ2 910 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 RALGPS2Q86X27 583 aaPredicted RBP18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 SHC3Q92529 594 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 FAM81BQ96LP2 452 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 ULBP1Q9BZM6 244 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 LRRC4Q9HBW1 653 aa18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNRPA1-201ENST00000254193 MDM4O15151 490 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 GABBR2O75899 941 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 LETM1O95202 739 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 ZBED1O96006 694 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 ATP5C1P36542 298 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 ADIGQ0VDE8 80 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 NCAPHQ15003 741 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 KLHL40Q2TBA0 621 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 C10orf120Q5SQS8 335 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 PMF1Q6P1K2 205 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 DDX42Q86XP3 938 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 AOPEPQ8N6M6 819 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 SLC35F5Q8WV83 523 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 WBP2Q969T9 261 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 MSANTD3Q96H12 275 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 PRRX2Q99811 253 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 LSM14BQ9BX40 385 aaKnown RBP18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 ECT2Q9H8V3 914 aa18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 ARIH1Q9Y4X5 557 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-201ENST00000254193 ZNF318Q5VUA4 2279 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 PIK3R2O00459 728 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 THAP12O43422 761 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 PNMA6AP0CW24 399 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 IRF1P10914 325 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 LCP1P13796 627 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 PSEN1P49768 467 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 PM20D1Q6GTS8 502 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 DENND1BQ6P3S1 775 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 SIX6OS1Q8N1H7 587 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 CPA6Q8N4T0 437 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 KCTD13Q8WZ19 329 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 ATP2A3Q93084 1043 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 CLDN23Q96B33 292 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 CHFRQ96EP1 664 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 KLF16Q9BXK1 252 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 NAT10Q9H0A0 1025 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 HSD3B7Q9H2F3 369 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 CLIC5Q9NZA1 410 aa18.88■□□□□ 0.61
SNRPA1-201ENST00000254193 H0Y858 1186 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 FOXN3O00409 490 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 NCAM2O15394 837 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 RALAP11233 206 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 ZNF18P17022 549 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 GNA15P30679 374 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 PTPN5P54829 565 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 YWHAGP61981 247 aaKnown RBP eCLIP18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 PON2Q15165 354 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 KLHDC7AQ5VTJ3 777 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 NAIF1Q69YI7 327 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 C1orf228Q6PIY5 440 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 BHLHA9Q7RTU4 235 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 ARHGAP18Q8N392 663 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 ZNF606Q8WXB4 792 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 LMAN1LQ9HAT1 526 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 RBM12Q9NTZ6 932 aaKnown RBP18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 DNMT3LQ9UJW3 386 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 SH3BP1Q9Y3L3 701 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 FHOD1Q9Y613 1164 aa18.87■□□□□ 0.61
SNRPA1-201ENST00000254193 MUC6Q6W4X9 2439 aa18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 E2F8A0AVK6 867 aa18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 SLC9A3R1O14745 358 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 MED7O43513 233 aa18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 TPM2P07951 284 aa18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 CHRNB1P11230 501 aa18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 CDK11BP21127 795 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 GJA4P35212 333 aa18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 GPD2P43304 727 aa18.86■□□□□ 0.61
SNRPA1-201ENST00000254193 KLHDC10Q6PID8 442 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms