RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C MRP7P12687 371 aa9.1□□□□□ -0.95
UME1YPL139C RAD24P32641 659 aa9.1□□□□□ -0.95
UME1YPL139C GAS5Q08193 484 aa9.1□□□□□ -0.95
UME1YPL139C FLO11P08640 1367 aa9.08□□□□□ -0.96
UME1YPL139C SET1P38827 1080 aaKnown RBP9.08□□□□□ -0.96
UME1YPL139C SPL2P38839 148 aa9.08□□□□□ -0.96
UME1YPL139C VPS29P38759 282 aa9.07□□□□□ -0.96
UME1YPL139C PEX21P50091 288 aa9.07□□□□□ -0.96
UME1YPL139C ITC1P53125 1264 aa9.07□□□□□ -0.96
UME1YPL139C DPL1Q05567 589 aa9.07□□□□□ -0.96
UME1YPL139C STV1P37296 890 aa9.06□□□□□ -0.96
UME1YPL139C FET4P40988 552 aa9.06□□□□□ -0.96
UME1YPL139C RTG2P32608 588 aaKnown RBP9.05□□□□□ -0.96
UME1YPL139C ICP55P40051 511 aa9.05□□□□□ -0.96
UME1YPL139C RPT4P53549 437 aaKnown RBP9.05□□□□□ -0.96
UME1YPL139C SAC3P46674 1301 aa9.05□□□□□ -0.96
UME1YPL139C KRE2P27809 442 aa9.04□□□□□ -0.96
UME1YPL139C VPS4P52917 437 aa9.04□□□□□ -0.96
UME1YPL139C DPH6Q12429 685 aa9.04□□□□□ -0.96
UME1YPL139C PTC4P38089 393 aa9.03□□□□□ -0.96
UME1YPL139C SRC1Q03707 834 aa9.03□□□□□ -0.96
UME1YPL139C TOS4Q06266 489 aa9.03□□□□□ -0.96
UME1YPL139C PSH1Q12161 406 aa9.03□□□□□ -0.96
UME1YPL139C DUR1,2P32528 1835 aaKnown RBP9.02□□□□□ -0.96
UME1YPL139C MGM1P32266 881 aa9.02□□□□□ -0.97
UME1YPL139C NGR1P32831 672 aaKnown RBP9.02□□□□□ -0.97
UME1YPL139C STS1P38637 319 aa9.02□□□□□ -0.97
UME1YPL139C CSI1Q04368 295 aa9.02□□□□□ -0.97
UME1YPL139C THI3Q07471 609 aa9.02□□□□□ -0.97
UME1YPL139C HTA1P04911 132 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C HTA2P04912 132 aa9.01□□□□□ -0.97
UME1YPL139C RPP0P05317 312 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C VPS27P40343 622 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C TRM44Q02648 567 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C RVB2Q12464 471 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C AFG2P32794 780 aa9□□□□□ -0.97
UME1YPL139C UBP12P39538 1254 aa9□□□□□ -0.97
UME1YPL139C BOI2P39969 1040 aa9□□□□□ -0.97
UME1YPL139C VHR2P40041 505 aa9□□□□□ -0.97
UME1YPL139C GSM1P42950 618 aa9□□□□□ -0.97
UME1YPL139C RPS9BP05755 195 aaKnown RBP8.99□□□□□ -0.97
UME1YPL139C GLC3P32775 704 aa8.99□□□□□ -0.97
UME1YPL139C SLA1P32790 1244 aa8.99□□□□□ -0.97
UME1YPL139C YDR344CQ05510 147 aa8.99□□□□□ -0.97
UME1YPL139C GYP5Q12344 894 aa8.99□□□□□ -0.97
UME1YPL139C MSM1P22438 575 aa8.99□□□□□ -0.97
UME1YPL139C LCB1P25045 558 aaKnown RBP8.99□□□□□ -0.97
UME1YPL139C ILV3P39522 585 aaKnown RBP8.99□□□□□ -0.97
UME1YPL139C YEL023CP39992 682 aa8.99□□□□□ -0.97
UME1YPL139C YPP1P46951 817 aa8.99□□□□□ -0.97
UME1YPL139C TIM50Q02776 476 aa8.99□□□□□ -0.97
UME1YPL139C IRC4Q03036 179 aa8.99□□□□□ -0.97
UME1YPL139C ETP1P38748 585 aaKnown RBP8.98□□□□□ -0.97
UME1YPL139C MTC5Q03897 1148 aa8.98□□□□□ -0.97
UME1YPL139C YGR117CP53270 476 aa8.97□□□□□ -0.97
UME1YPL139C DAL5P15365 543 aa8.96□□□□□ -0.98
UME1YPL139C HPR1P17629 752 aaKnown RBP8.96□□□□□ -0.98
UME1YPL139C YIL092WP40497 633 aa8.96□□□□□ -0.98
UME1YPL139C YIL089WP40500 205 aa8.96□□□□□ -0.98
UME1YPL139C EMP47P43555 445 aa8.96□□□□□ -0.98
UME1YPL139C ELP4Q02884 456 aaKnown RBP8.96□□□□□ -0.98
UME1YPL139C CDC45Q08032 650 aa8.96□□□□□ -0.98
UME1YPL139C RRG1Q12167 365 aaPredicted RBP8.96□□□□□ -0.98
UME1YPL139C AIM7Q12156 149 aa8.95□□□□□ -0.98
UME1YPL139C ADR1P07248 1323 aa8.94□□□□□ -0.98
UME1YPL139C RPS19AP07280 144 aaKnown RBP8.94□□□□□ -0.98
UME1YPL139C RPS19BP07281 144 aaPredicted RBP8.94□□□□□ -0.98
UME1YPL139C DCW1P36091 449 aa8.94□□□□□ -0.98
UME1YPL139C UTP7P40055 554 aaKnown RBP8.94□□□□□ -0.98
UME1YPL139C RPS7AP26786 190 aaKnown RBP8.93□□□□□ -0.98
UME1YPL139C RPT3P33298 428 aaKnown RBP8.93□□□□□ -0.98
UME1YPL139C FUN12P39730 1002 aaKnown RBP8.93□□□□□ -0.98
UME1YPL139C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
UME1YPL139C NOP8Q08287 484 aaPredicted RBP8.93□□□□□ -0.98
UME1YPL139C DMA1P38823 416 aa8.92□□□□□ -0.98
UME1YPL139C PRP42Q03776 544 aaKnown RBP8.92□□□□□ -0.98
UME1YPL139C UBX2Q04228 584 aa8.92□□□□□ -0.98
UME1YPL139C POM152P39685 1337 aa8.91□□□□□ -0.98
UME1YPL139C ARG82P07250 355 aa8.91□□□□□ -0.98
UME1YPL139C PRS1P32895 427 aaKnown RBP8.91□□□□□ -0.98
UME1YPL139C PNT1P38969 423 aa8.91□□□□□ -0.98
UME1YPL139C PEA2P40091 420 aa8.91□□□□□ -0.98
UME1YPL139C MTC3P53077 123 aa8.91□□□□□ -0.98
UME1YPL139C MAK21Q12176 1025 aaKnown RBP8.91□□□□□ -0.98
UME1YPL139C GLO3P38682 493 aaKnown RBP8.9□□□□□ -0.98
UME1YPL139C DUS1P53759 423 aaKnown RBP8.9□□□□□ -0.98
UME1YPL139C WRS1Q12109 432 aaKnown RBP8.89□□□□□ -0.99
UME1YPL139C SNU66Q12420 587 aaPredicted RBP8.89□□□□□ -0.99
UME1YPL139C CBP1P07252 654 aa8.88□□□□□ -0.99
UME1YPL139C SEC18P18759 758 aaKnown RBP8.88□□□□□ -0.99
UME1YPL139C YIR042CP40586 236 aa8.88□□□□□ -0.99
UME1YPL139C SPO1P53541 631 aa8.88□□□□□ -0.99
UME1YPL139C CRF1Q04930 467 aa8.88□□□□□ -0.99
UME1YPL139C FLO1P32768 1537 aa8.88□□□□□ -0.99
UME1YPL139C YNL193WP53870 558 aa8.87□□□□□ -0.99
UME1YPL139C KTR3P38130 404 aaPredicted RBP8.86□□□□□ -0.99
UME1YPL139C HAL5P38970 855 aaKnown RBP8.86□□□□□ -0.99
UME1YPL139C NSG2P53898 299 aa8.86□□□□□ -0.99
UME1YPL139C CWC15Q03772 175 aaKnown RBP8.86□□□□□ -0.99
UME1YPL139C RPN7Q06103 429 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms