RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W KAP122P32767 1081 aa5.64□□□□□ -1.51
SEC22YLR268W ATG32P40458 529 aa5.64□□□□□ -1.51
SEC22YLR268W INP52P50942 1183 aa5.64□□□□□ -1.51
SEC22YLR268W ALO1P54783 526 aaKnown RBP5.64□□□□□ -1.51
SEC22YLR268W CUS1Q02554 436 aaPredicted RBP5.64□□□□□ -1.51
SEC22YLR268W ACS2P52910 683 aaKnown RBP5.63□□□□□ -1.51
SEC22YLR268W GAS4Q08271 471 aa5.63□□□□□ -1.51
SEC22YLR268W HAP4P14064 554 aa5.62□□□□□ -1.51
SEC22YLR268W RPC31P17890 251 aa5.62□□□□□ -1.51
SEC22YLR268W OMA1P36163 345 aa5.62□□□□□ -1.51
SEC22YLR268W HXT5P38695 592 aa5.62□□□□□ -1.51
SEC22YLR268W APM2P38700 605 aa5.62□□□□□ -1.51
SEC22YLR268W RPL34BP40525 121 aaKnown RBP5.62□□□□□ -1.51
SEC22YLR268W HGH1P48362 394 aaKnown RBP5.62□□□□□ -1.51
SEC22YLR268W ARI1P53111 347 aaKnown RBP5.62□□□□□ -1.51
SEC22YLR268W SAC7P17121 654 aa5.61□□□□□ -1.51
SEC22YLR268W NAB2P32505 525 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
SEC22YLR268W SFA1P32771 386 aa5.61□□□□□ -1.51
SEC22YLR268W NGR1P32831 672 aaKnown RBP5.61□□□□□ -1.51
SEC22YLR268W SLP1Q12232 587 aa5.61□□□□□ -1.51
SEC22YLR268W GLT1Q12680 2145 aaKnown RBP5.6□□□□□ -1.51
SEC22YLR268W SIS2P36024 562 aa5.6□□□□□ -1.51
SEC22YLR268W RRM3P38766 723 aa5.59□□□□□ -1.51
SEC22YLR268W IRC24P40580 263 aa5.59□□□□□ -1.51
SEC22YLR268W YNR040WP53736 256 aa5.59□□□□□ -1.51
SEC22YLR268W YER156CP40093 338 aaKnown RBP5.57□□□□□ -1.52
SEC22YLR268W GAS5Q08193 484 aa5.57□□□□□ -1.52
SEC22YLR268W IDI1P15496 288 aa5.56□□□□□ -1.52
SEC22YLR268W QDR2P40474 542 aa5.55□□□□□ -1.52
SEC22YLR268W COQ2P32378 372 aa5.54□□□□□ -1.52
SEC22YLR268W KTR7P40504 517 aa5.54□□□□□ -1.52
SEC22YLR268W ROM1P53046 1155 aa5.54□□□□□ -1.52
SEC22YLR268W GAL2P13181 574 aa5.53□□□□□ -1.52
SEC22YLR268W ITC1P53125 1264 aa5.53□□□□□ -1.52
SEC22YLR268W MED7Q08278 222 aa5.53□□□□□ -1.52
SEC22YLR268W MRP10O75012 95 aa5.52□□□□□ -1.53
SEC22YLR268W VAN1P23642 535 aa5.52□□□□□ -1.53
SEC22YLR268W RSC6P25632 483 aa5.52□□□□□ -1.53
SEC22YLR268W KAE1P36132 386 aa5.52□□□□□ -1.53
SEC22YLR268W YKR073CP36153 106 aa5.51□□□□□ -1.53
SEC22YLR268W CWH41P53008 833 aa5.51□□□□□ -1.53
SEC22YLR268W YOR296WQ08748 1289 aa5.51□□□□□ -1.53
SEC22YLR268W YLR122CQ12312 125 aa5.51□□□□□ -1.53
SEC22YLR268W CAB1Q04430 367 aa5.5□□□□□ -1.53
SEC22YLR268W TRS33Q99394 268 aa5.5□□□□□ -1.53
SEC22YLR268W TY4B-PA0A0B7P3V8 1104 aa5.49□□□□□ -1.53
SEC22YLR268W TRP3P00937 484 aa5.49□□□□□ -1.53
SEC22YLR268W DYS1P38791 387 aa5.49□□□□□ -1.53
SEC22YLR268W RSC2Q06488 889 aa5.49□□□□□ -1.53
SEC22YLR268W TY4A-HQ6Q5P6 413 aa5.49□□□□□ -1.53
SEC22YLR268W MRPL33P20084 86 aa5.48□□□□□ -1.53
SEC22YLR268W TY1A-NL1Q12391 440 aaKnown RBP5.48□□□□□ -1.53
SEC22YLR268W VMA3P25515 160 aa5.47□□□□□ -1.53
SEC22YLR268W GIP1P38229 639 aa5.47□□□□□ -1.53
SEC22YLR268W SAF1P38352 637 aa5.47□□□□□ -1.53
SEC22YLR268W GIP2P40036 548 aa5.47□□□□□ -1.53
SEC22YLR268W AVT1P47082 602 aa5.47□□□□□ -1.53
SEC22YLR268W DSE4P53753 1117 aa5.47□□□□□ -1.53
SEC22YLR268W SUV3P32580 737 aa5.46□□□□□ -1.54
SEC22YLR268W PUB1P32588 453 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
SEC22YLR268W TED1P40533 473 aa5.46□□□□□ -1.54
SEC22YLR268W AOS1Q06624 347 aa5.46□□□□□ -1.54
SEC22YLR268W TOS1P38288 455 aa5.45□□□□□ -1.54
SEC22YLR268W CHS2P14180 963 aa5.44□□□□□ -1.54
SEC22YLR268W TGL4P36165 910 aa5.44□□□□□ -1.54
SEC22YLR268W ISW1P38144 1129 aa5.44□□□□□ -1.54
SEC22YLR268W BSD2P38356 321 aa5.44□□□□□ -1.54
SEC22YLR268W CTH1P47976 325 aa5.44□□□□□ -1.54
SEC22YLR268W SOK2P53438 785 aaPredicted RBP5.44□□□□□ -1.54
SEC22YLR268W ELM1P32801 640 aa5.43□□□□□ -1.54
SEC22YLR268W LIP5P32875 414 aa5.43□□□□□ -1.54
SEC22YLR268W LDH1P38139 375 aa5.43□□□□□ -1.54
SEC22YLR268W REC8Q12188 680 aa5.43□□□□□ -1.54
SEC22YLR268W PPT1P53043 513 aa5.42□□□□□ -1.54
SEC22YLR268W FOX2Q02207 900 aaKnown RBP5.42□□□□□ -1.54
SEC22YLR268W BRE4Q07660 1125 aa5.42□□□□□ -1.54
SEC22YLR268W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SEC22YLR268W YBR197CP38306 217 aa5.41□□□□□ -1.54
SEC22YLR268W YIL165CP40446 119 aa5.41□□□□□ -1.54
SEC22YLR268W LEM3P42838 414 aa5.41□□□□□ -1.54
SEC22YLR268W YGR130CP53278 816 aa5.41□□□□□ -1.54
SEC22YLR268W AKR1P39010 764 aa5.4□□□□□ -1.54
SEC22YLR268W SPO74P45819 413 aa5.4□□□□□ -1.54
SEC22YLR268W GUP1P53154 560 aa5.4□□□□□ -1.54
SEC22YLR268W ECM23Q02710 187 aa5.4□□□□□ -1.54
SEC22YLR268W MAG2Q06436 670 aaKnown RBP5.4□□□□□ -1.54
SEC22YLR268W TTI1P36097 1038 aa5.39□□□□□ -1.55
SEC22YLR268W INP51P40559 946 aaKnown RBP5.39□□□□□ -1.55
SEC22YLR268W NAM7P30771 971 aaKnown RBP5.38□□□□□ -1.55
SEC22YLR268W YJL181WP46987 611 aa5.38□□□□□ -1.55
SEC22YLR268W SOG2Q08817 791 aa5.38□□□□□ -1.55
SEC22YLR268W CYC7P00045 113 aa5.37□□□□□ -1.55
SEC22YLR268W YBR287WP38355 427 aa5.37□□□□□ -1.55
SEC22YLR268W PAN5P38787 379 aa5.37□□□□□ -1.55
SEC22YLR268W MSN1P22148 382 aa5.36□□□□□ -1.55
SEC22YLR268W ISC10P32645 267 aa5.36□□□□□ -1.55
SEC22YLR268W UBX7P38349 436 aa5.36□□□□□ -1.55
SEC22YLR268W ALD4P46367 519 aaKnown RBP5.36□□□□□ -1.55
SEC22YLR268W BIO5P53744 561 aaKnown RBP5.36□□□□□ -1.55
SEC22YLR268W PUF6Q04373 656 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms