RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C CFT1Q06632 1357 aaKnown RBP9.17□□□□□ -0.94
NUP57YGR119C UBX7P38349 436 aa9.17□□□□□ -0.94
NUP57YGR119C CST6P40535 587 aa9.17□□□□□ -0.94
NUP57YGR119C FRK1Q03002 865 aaPredicted RBP9.17□□□□□ -0.94
NUP57YGR119C MAK10Q02197 733 aa9.16□□□□□ -0.94
NUP57YGR119C CDC3P32457 520 aaKnown RBP9.16□□□□□ -0.94
NUP57YGR119C SCT1P32784 759 aa9.16□□□□□ -0.94
NUP57YGR119C BCK2P33306 851 aa9.16□□□□□ -0.94
NUP57YGR119C ISR1Q06098 443 aaKnown RBP9.15□□□□□ -0.94
NUP57YGR119C HAL5P38970 855 aaKnown RBP9.14□□□□□ -0.95
NUP57YGR119C SPE2P21182 396 aa9.13□□□□□ -0.95
NUP57YGR119C PHO87P25360 923 aa9.13□□□□□ -0.95
NUP57YGR119C SYH1Q02875 849 aaKnown RBP9.13□□□□□ -0.95
NUP57YGR119C APP1P53933 587 aa9.13□□□□□ -0.95
NUP57YGR119C ATG20Q07528 640 aa9.13□□□□□ -0.95
NUP57YGR119C ACS2P52910 683 aaKnown RBP9.12□□□□□ -0.95
NUP57YGR119C NOP8Q08287 484 aaPredicted RBP9.12□□□□□ -0.95
NUP57YGR119C YEL077CQ3E7X8 1277 aa9.11□□□□□ -0.95
NUP57YGR119C RPP0P05317 312 aaKnown RBP9.1□□□□□ -0.95
NUP57YGR119C MIP1P15801 1254 aa9.1□□□□□ -0.95
NUP57YGR119C CBC2Q08920 208 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
NUP57YGR119C HAP4P14064 554 aa9.09□□□□□ -0.95
NUP57YGR119C BCK1Q01389 1478 aa9.09□□□□□ -0.95
NUP57YGR119C PDI1P17967 522 aaKnown RBP9.09□□□□□ -0.95
NUP57YGR119C EMW1P42842 904 aaKnown RBP9.09□□□□□ -0.95
NUP57YGR119C ROM1P53046 1155 aa9.09□□□□□ -0.95
NUP57YGR119C CDC45Q08032 650 aa9.09□□□□□ -0.95
NUP57YGR119C TSC13Q99190 310 aa9.09□□□□□ -0.95
NUP57YGR119C VPS27P40343 622 aaKnown RBP9.08□□□□□ -0.96
NUP57YGR119C HAP1P0CE41 1502 aa9.07□□□□□ -0.96
NUP57YGR119C FUN12P39730 1002 aaKnown RBP9.06□□□□□ -0.96
NUP57YGR119C AIM9P40053 627 aaKnown RBP9.06□□□□□ -0.96
NUP57YGR119C HDA3Q06623 655 aa9.06□□□□□ -0.96
NUP57YGR119C TYS1P36421 394 aaKnown RBP9.05□□□□□ -0.96
NUP57YGR119C XDJ1P39102 459 aa9.05□□□□□ -0.96
NUP57YGR119C GAS4Q08271 471 aa9.05□□□□□ -0.96
NUP57YGR119C HAT1Q12341 374 aa9.05□□□□□ -0.96
NUP57YGR119C MLP1Q02455 1875 aaKnown RBP9.05□□□□□ -0.96
NUP57YGR119C TY1B-NL2Q99337 1749 aaKnown RBP9.05□□□□□ -0.96
NUP57YGR119C TPS3P38426 1054 aaKnown RBP9.05□□□□□ -0.96
NUP57YGR119C TAF8Q03750 510 aa9.05□□□□□ -0.96
NUP57YGR119C IOC4Q04213 475 aa9.05□□□□□ -0.96
NUP57YGR119C RAD9P14737 1309 aa9.04□□□□□ -0.96
NUP57YGR119C SSF1P38789 453 aaPredicted RBP9.04□□□□□ -0.96
NUP57YGR119C IPL1P38991 367 aa9.04□□□□□ -0.96
NUP57YGR119C RVB2Q12464 471 aaKnown RBP9.04□□□□□ -0.96
NUP57YGR119C SNF2P22082 1703 aa9.02□□□□□ -0.96
NUP57YGR119C AMS1P22855 1083 aa9.02□□□□□ -0.96
NUP57YGR119C YFL034WP43564 1073 aa9.02□□□□□ -0.96
NUP57YGR119C ALD4P46367 519 aaKnown RBP9.02□□□□□ -0.96
NUP57YGR119C FBP26P32604 452 aa9.02□□□□□ -0.97
NUP57YGR119C MKS1P34072 584 aa9.02□□□□□ -0.97
NUP57YGR119C CWC15Q03772 175 aaKnown RBP9.02□□□□□ -0.97
NUP57YGR119C PUF6Q04373 656 aaKnown RBP9.02□□□□□ -0.97
NUP57YGR119C YDL144CQ07589 356 aa9.02□□□□□ -0.97
NUP57YGR119C YEF3P16521 1044 aaKnown RBP9.01□□□□□ -0.97
NUP57YGR119C CHZ1P40019 153 aaPredicted RBP9.01□□□□□ -0.97
NUP57YGR119C ISU1Q03020 165 aa9.01□□□□□ -0.97
NUP57YGR119C TRK1P12685 1235 aa9□□□□□ -0.97
NUP57YGR119C MRT4P33201 236 aaKnown RBP9□□□□□ -0.97
NUP57YGR119C YML133CQ03099 1374 aa8.99□□□□□ -0.97
NUP57YGR119C YLL067CQ07888 1374 aa8.99□□□□□ -0.97
NUP57YGR119C YLL066CQ99208 1374 aa8.99□□□□□ -0.97
NUP57YGR119C RPC31P17890 251 aa8.99□□□□□ -0.97
NUP57YGR119C YRB30P53107 440 aaPredicted RBP8.99□□□□□ -0.97
NUP57YGR119C UTR2P32623 467 aa8.98□□□□□ -0.97
NUP57YGR119C NTH2P35172 780 aa8.98□□□□□ -0.97
NUP57YGR119C HED1Q03937 162 aa8.98□□□□□ -0.97
NUP57YGR119C CLA4P48562 842 aa8.98□□□□□ -0.97
NUP57YGR119C SUI2P20459 304 aaKnown RBP8.97□□□□□ -0.97
NUP57YGR119C VAN1P23642 535 aa8.97□□□□□ -0.97
NUP57YGR119C YBL086CP38177 466 aa8.96□□□□□ -0.98
NUP57YGR119C KAR5Q04746 504 aa8.96□□□□□ -0.98
NUP57YGR119C PUN1Q06991 263 aa8.96□□□□□ -0.98
NUP57YGR119C SPT2P06843 333 aaPredicted RBP8.95□□□□□ -0.98
NUP57YGR119C RPS6AP0CX37 236 aaKnown RBP8.95□□□□□ -0.98
NUP57YGR119C RPS6BP0CX38 236 aaPredicted RBP8.95□□□□□ -0.98
NUP57YGR119C FPR3P38911 411 aaKnown RBP8.95□□□□□ -0.98
NUP57YGR119C CAB1Q04430 367 aa8.95□□□□□ -0.98
NUP57YGR119C DFG5Q05031 458 aa8.95□□□□□ -0.98
NUP57YGR119C PNP1Q05788 311 aa8.95□□□□□ -0.98
NUP57YGR119C SWI5P08153 709 aa8.94□□□□□ -0.98
NUP57YGR119C NAP1P25293 417 aaKnown RBP8.94□□□□□ -0.98
NUP57YGR119C SLD2P34252 453 aa8.94□□□□□ -0.98
NUP57YGR119C THI12P42883 340 aa8.94□□□□□ -0.98
NUP57YGR119C THI5P43534 340 aa8.94□□□□□ -0.98
NUP57YGR119C THI11P47183 340 aa8.94□□□□□ -0.98
NUP57YGR119C THI13Q07748 340 aa8.94□□□□□ -0.98
NUP57YGR119C YBL113CQ7M4S9 792 aa8.94□□□□□ -0.98
NUP57YGR119C TRS33Q99394 268 aa8.94□□□□□ -0.98
NUP57YGR119C RAS1P01119 309 aa8.94□□□□□ -0.98
NUP57YGR119C MPP10P47083 593 aaKnown RBP8.94□□□□□ -0.98
NUP57YGR119C CYT1P07143 309 aa8.93□□□□□ -0.98
NUP57YGR119C STE6P12866 1290 aa8.93□□□□□ -0.98
NUP57YGR119C SRS2P12954 1174 aa8.93□□□□□ -0.98
NUP57YGR119C DAT1P13483 248 aaKnown RBP8.93□□□□□ -0.98
NUP57YGR119C UBP1P25037 809 aa8.93□□□□□ -0.98
NUP57YGR119C MET32Q12041 191 aa8.93□□□□□ -0.98
NUP57YGR119C IME2P32581 645 aa8.92□□□□□ -0.98
NUP57YGR119C TBS1P38114 1094 aa8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms